Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA13P31271 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXA13P31271 AC022336.2-201ENST00000568966 2538 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 GABRG2-229ENST00000641017 3628 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA13P31271 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXA13P31271 RNU6-179P-201ENST00000363350 107 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 RNU6-884P-201ENST00000363889 107 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 Y_RNA.409-201ENST00000383990 98 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AL356057.3-201ENST00000402607 340 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 USP9YP6-201ENST00000413550 854 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AL451074.5-201ENST00000415894 435 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 SNRPEP9-201ENST00000436794 238 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 RPS29P6-201ENST00000438196 145 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AL513043.1-201ENST00000439124 535 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA13P31271 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA13P31271 AC003071.1-201ENST00000451219 789 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA13P31271 AL121769.1-201ENST00000469473 401 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 RPS15AP34-201ENST00000487776 387 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC116562.3-201ENST00000506136 177 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC109927.2-201ENST00000506416 303 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 RNU6-314P-201ENST00000516574 104 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC093331.1-201ENST00000521474 169 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC068587.5-201ENST00000528506 175 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 OR5B19P-201ENST00000531766 928 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA13P31271 ADI1P3-201ENST00000549509 470 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXA13P31271 MIR4801-201ENST00000582704 82 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 AL391646.1-201ENST00000603860 190 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 FTX_3.1-201ENST00000610451 147 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXA13P31271 MIR6863-201ENST00000636112 90 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 U6.114-201ENST00000636407 96 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 Z99571.1-201ENST00000636677 394 ntBASIC3.13□□□□□ -1.91
HOXA13P31271 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HOXA13P31271 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA13P31271 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA13P31271 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 Y_RNA.381-201ENST00000365666 102 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 CD24P4-201ENST00000382840 243 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 SNORA24.1-201ENST00000384401 135 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 MIR1-2-201ENST00000384961 85 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 SNORD115-47-201ENST00000391226 86 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 SDCBPP3-201ENST00000419629 891 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 ARL5AP4-201ENST00000430731 512 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AL139415.2-201ENST00000431968 163 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 UBE2V1P8-201ENST00000437166 265 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 RPS15AP9-201ENST00000439856 381 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA13P31271 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA13P31271 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.12□□□□□ -1.91
HOXA13P31271 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXA13P31271 AC134698.4-201ENST00000523451 826 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 FAM92A1P1-201ENST00000528023 890 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 OR4R1P-201ENST00000529879 463 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC136619.2-201ENST00000563361 631 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC008536.2-201ENST00000607284 349 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC005046.1-201ENST00000608515 625 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC010338.1-201ENST00000621823 717 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 AC124864.2-201ENST00000624736 186 ntBASIC3.12□□□□□ -1.91
HOXA13P31271 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA13P31271 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA13P31271 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXA13P31271 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXA13P31271 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXA13P31271 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
HOXA13P31271 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HOXA13P31271 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA13P31271 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA13P31271 ELF2P3-201ENST00000445099 1506 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXA13P31271 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXA13P31271 Y_RNA.22-201ENST00000362492 102 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 Y_RNA.159-201ENST00000363674 87 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 RNU6-1090P-201ENST00000364065 94 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 Y_RNA.248-201ENST00000364501 109 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 Y_RNA.256-201ENST00000364594 104 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 MIR34A-201ENST00000385130 110 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 AC068050.1-201ENST00000394891 380 ntBASIC3.11□□□□□ -1.91
HOXA13P31271 GSTA9P-201ENST00000406231 611 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms