Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORA40.14-201ENST00000516543 86 ntBASIC5□□□□□ -1.61
RXRBP28702 RNU6-111P-201ENST00000517179 105 ntBASIC5□□□□□ -1.61
RXRBP28702 DEFB108D-201ENST00000527787 222 ntBASIC5□□□□□ -1.61
RXRBP28702 AC040926.1-201ENST00000530195 238 ntBASIC5□□□□□ -1.61
RXRBP28702 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5□□□□□ -1.61
RXRBP28702 MIR4512-201ENST00000583257 77 ntBASIC5□□□□□ -1.61
RXRBP28702 AL138889.2-201ENST00000603883 242 ntBASIC5□□□□□ -1.61
RXRBP28702 AL031176.1-201ENST00000604554 466 ntBASIC5□□□□□ -1.61
RXRBP28702 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RXRBP28702 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5□□□□□ -1.61
RXRBP28702 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RXRBP28702 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
RXRBP28702 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5□□□□□ -1.61
RXRBP28702 NOL8P1-201ENST00000508336 3529 ntBASIC5□□□□□ -1.61
RXRBP28702 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RXRBP28702 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 HSPA8P4-201ENST00000511877 1920 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RXRBP28702 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.99□□□□□ -1.61
RXRBP28702 AC007685.1-201ENST00000329806 452 ntBASIC4.99□□□□□ -1.61
RXRBP28702 RNU6-1284P-201ENST00000363701 100 ntBASIC4.99□□□□□ -1.61
RXRBP28702 RNU6-434P-201ENST00000384376 107 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AL445529.1-201ENST00000398713 389 ntBASIC4.99□□□□□ -1.61
RXRBP28702 MIR1261-201ENST00000408659 82 ntBASIC4.99□□□□□ -1.61
RXRBP28702 PIGPP3-201ENST00000425307 415 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC025750.2-201ENST00000442609 450 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC073587.1-201ENST00000447093 876 ntBASIC4.99□□□□□ -1.61
RXRBP28702 RNU7-187P-201ENST00000458985 68 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.99□□□□□ -1.61
RXRBP28702 AC108860.1-201ENST00000484521 383 ntBASIC4.99□□□□□ -1.61
RXRBP28702 RPL23AP55-201ENST00000498163 452 ntBASIC4.99□□□□□ -1.61
RXRBP28702 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 AC092436.3-201ENST00000511788 257 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 AC016065.2-201ENST00000514530 444 ntBASIC4.99□□□□□ -1.61
RXRBP28702 RNU6-307P-201ENST00000516743 106 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC100870.1-201ENST00000522035 505 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AP003385.6-201ENST00000531603 374 ntBASIC4.99□□□□□ -1.61
RXRBP28702 HSPE1P20-201ENST00000538133 289 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AC008162.1-201ENST00000604718 254 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AL033523.1-201ENST00000605153 153 ntBASIC4.99□□□□□ -1.61
RXRBP28702 AL670379.4-201ENST00000605279 254 ntBASIC4.99□□□□□ -1.61
RXRBP28702 MIR7851-201ENST00000610611 160 ntBASIC4.99□□□□□ -1.61
RXRBP28702 FTX_2.1-201ENST00000618816 94 ntBASIC4.99□□□□□ -1.61
RXRBP28702 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 GABPAP-201ENST00000419271 1356 ntBASIC4.99□□□□□ -1.61
RXRBP28702 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.99□□□□□ -1.61
RXRBP28702 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RXRBP28702 AC000123.3-201ENST00000624029 4975 ntBASIC4.98□□□□□ -1.61
RXRBP28702 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RXRBP28702 AC008669.1-201ENST00000565823 2178 ntBASIC4.98□□□□□ -1.61
RXRBP28702 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RXRBP28702 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RXRBP28702 Y_RNA.180-201ENST00000363867 113 ntBASIC4.98□□□□□ -1.61
RXRBP28702 RNU6-754P-201ENST00000391166 107 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AL109755.1-201ENST00000401791 649 ntBASIC4.98□□□□□ -1.61
RXRBP28702 RNU6-516P-201ENST00000411381 104 ntBASIC4.98□□□□□ -1.61
RXRBP28702 RPL23AP50-201ENST00000434149 455 ntBASIC4.98□□□□□ -1.61
RXRBP28702 RANP8-201ENST00000444720 713 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.98□□□□□ -1.61
RXRBP28702 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.98□□□□□ -1.61
RXRBP28702 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.98□□□□□ -1.61
RXRBP28702 SNORA25.11-201ENST00000515935 105 ntBASIC4.98□□□□□ -1.61
RXRBP28702 RNA5SP341-201ENST00000516261 117 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.98□□□□□ -1.61
RXRBP28702 CYCSP27-201ENST00000527643 293 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.98□□□□□ -1.61
RXRBP28702 AC025423.5-201ENST00000550230 219 ntBASIC4.98□□□□□ -1.61
RXRBP28702 SETP7-201ENST00000552169 453 ntBASIC4.98□□□□□ -1.61
RXRBP28702 MIR5680-201ENST00000577577 84 ntBASIC4.98□□□□□ -1.61
RXRBP28702 SDR42E1P2-201ENST00000614861 481 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AL359547.2-201ENST00000615810 418 ntBASIC4.98□□□□□ -1.61
RXRBP28702 SDR42E1P4-201ENST00000620894 481 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AC091903.1-201ENST00000624322 454 ntBASIC4.98□□□□□ -1.61
RXRBP28702 AC091925.2-201ENST00000625059 256 ntBASIC4.98□□□□□ -1.61
RXRBP28702 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RXRBP28702 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RXRBP28702 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.98□□□□□ -1.61
RXRBP28702 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RXRBP28702 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
RXRBP28702 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.97□□□□□ -1.61
RXRBP28702 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 XIAPP3-201ENST00000312918 795 ntBASIC4.97□□□□□ -1.61
RXRBP28702 RNU4-42P-201ENST00000364738 142 ntBASIC4.97□□□□□ -1.61
RXRBP28702 Y_RNA.314-201ENST00000365114 102 ntBASIC4.97□□□□□ -1.61
RXRBP28702 SNORA48.8-201ENST00000391324 134 ntBASIC4.97□□□□□ -1.61
RXRBP28702 RNU2-14P-201ENST00000411053 191 ntBASIC4.97□□□□□ -1.61
RXRBP28702 RPS23P10-201ENST00000416185 486 ntBASIC4.97□□□□□ -1.61
RXRBP28702 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RXRBP28702 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 410.3 ms