Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC090897.2-201ENST00000581715 130 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 BNIP3P40-201ENST00000596017 556 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC016597.2-201ENST00000613256 341 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 CTSLP2-204ENST00000629029 392 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC103706.2-201ENST00000638080 240 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 AC006927.4-201ENST00000639187 543 ntBASIC1.73□□□□□ -2.13
HLA-DMAP28067 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 UBE2L2-201ENST00000254302 429 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 SNORA5B-201ENST00000363786 132 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 RNA5SP240-201ENST00000365355 128 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 RNU6-1200P-201ENST00000384162 107 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 NDUFB4P4-201ENST00000404822 243 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AL356432.1-201ENST00000405809 419 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 Z98742.2-201ENST00000431564 187 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC009238.1-201ENST00000442165 424 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC009237.6-201ENST00000446969 424 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 RNU7-59P-201ENST00000459101 61 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC117503.1-201ENST00000472241 394 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC096576.1-201ENST00000489014 359 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC104685.1-201ENST00000502445 371 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC110760.3-202ENST00000515177 371 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 RN7SKP258-201ENST00000517151 304 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC087276.1-201ENST00000529659 480 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AP000907.2-201ENST00000530827 353 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC093012.1-202ENST00000549403 582 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 EIF4BP1-201ENST00000554881 351 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC021739.1-201ENST00000559631 174 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 LINC00933-203ENST00000559812 219 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AL391001.1-201ENST00000602747 715 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC011458.1-201ENST00000604034 617 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC007938.3-201ENST00000604965 623 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC108747.1-201ENST00000609508 535 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC021755.4-201ENST00000616620 456 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC007490.1-201ENST00000624321 703 ntBASIC1.72□□□□□ -2.13
HLA-DMAP28067 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DMAP28067 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HLA-DMAP28067 MTND5P29-201ENST00000458676 1807 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 SNORD113-6-201ENST00000363345 75 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 RNU6-931P-201ENST00000363850 107 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 RNU6-701P-201ENST00000384059 107 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 HMGN2P39-201ENST00000398005 273 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 SNORA11.4-201ENST00000408823 129 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 RNU6-584P-201ENST00000410350 95 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 HMGN2P10-201ENST00000448085 265 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 CYP2C59P-201ENST00000457790 269 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC106872.3-201ENST00000495104 446 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 HMGB3P17-201ENST00000504195 649 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AP006587.4-201ENST00000526053 529 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 MRPS36P5-201ENST00000551909 298 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 MIR4307-201ENST00000582802 84 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC068790.3-201ENST00000602988 553 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC091152.3-201ENST00000604227 325 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC091965.4-201ENST00000607691 587 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC011939.3-201ENST00000613686 466 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 MIR5739-201ENST00000619803 80 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 AC079416.3-201ENST00000624479 549 ntBASIC1.71□□□□□ -2.14
HLA-DMAP28067 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DMAP28067 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms