Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC073114.1-201ENST00000612027 490 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AL357080.1-201ENST00000617394 239 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AC009318.4-201ENST00000620496 486 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A1P20908 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A1P20908 MTND5P3-201ENST00000438536 1800 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 Z82195.2-201ENST00000612348 18351 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 RNU6-777P-201ENST00000364265 104 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 SNORD56.5-201ENST00000364281 72 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 RNU6-392P-201ENST00000364926 101 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 Y_RNA.553-201ENST00000384670 102 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 SNORD115.1-201ENST00000391109 76 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 FCF1P10-201ENST00000407590 479 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AL023807.1-201ENST00000407932 359 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 WARS2P1-201ENST00000429678 537 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 USP9YP28-201ENST00000435142 589 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.75□□□□□ -2.13
COL5A1P20908 RNU7-59P-201ENST00000459101 61 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC087879.1-201ENST00000474343 374 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 RAP1BP2-201ENST00000478270 544 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.75□□□□□ -2.13
COL5A1P20908 AC091965.2-201ENST00000512324 613 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 MTND3P5-201ENST00000512798 333 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 OR4P1P-201ENST00000530808 1136 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 AL163153.1-201ENST00000554223 283 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 DNAJC8P1-201ENST00000554535 372 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 MIR544B-201ENST00000582372 78 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC073648.5-201ENST00000603502 305 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AL136363.2-201ENST00000604173 851 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC019159.1-201ENST00000605094 187 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A1P20908 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 PABPC1P7-201ENST00000413177 1513 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A1P20908 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A1P20908 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A1P20908 GDI2P1-201ENST00000429312 1336 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 MAPK10-266ENST00000641066 6555 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 KPNA2P1-201ENST00000458289 1591 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 RNU5F-6P-201ENST00000362979 116 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 MTCYBP24-201ENST00000420387 1106 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AL035410.1-201ENST00000427409 427 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 OR51AB1P-201ENST00000429046 620 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 RPL36P19-201ENST00000430744 301 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 MTCO1P19-201ENST00000443487 500 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 GDI2P2-201ENST00000445131 608 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 COX6CP12-201ENST00000446748 202 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.75□□□□□ -2.13
COL5A1P20908 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
COL5A1P20908 AC116337.2-201ENST00000477662 156 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 CDC42P4-201ENST00000510507 563 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 FABP5P5-201ENST00000515537 406 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 MTCO2P4-201ENST00000517968 247 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.75□□□□□ -2.13
COL5A1P20908 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.75□□□□□ -2.13
COL5A1P20908 AP003033.1-201ENST00000527244 415 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC022880.1-201ENST00000534017 973 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.75□□□□□ -2.13
COL5A1P20908 EEF1B2P4-201ENST00000551398 348 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC012213.3-201ENST00000577199 777 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 MIR4528-201ENST00000577763 90 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.75□□□□□ -2.13
COL5A1P20908 APOOP1-201ENST00000604695 592 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC090578.1-201ENST00000604955 591 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL5A1P20908 AC004223.4-201ENST00000612426 332 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 Z99129.1-201ENST00000612510 255 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AL353748.2-201ENST00000622148 471 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AP001350.1-201ENST00000601906 1524 ntBASIC1.75□□□□□ -2.13
COL5A1P20908 AC233981.2-201ENST00000611524 1614 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL5A1P20908 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL5A1P20908 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.74□□□□□ -2.13
COL5A1P20908 CCT4P2-201ENST00000233836 1548 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL5A1P20908 RNU6-1243P-201ENST00000364028 107 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 RNU6-629P-201ENST00000384061 103 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 RNU6-1215P-201ENST00000384441 102 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 RNY3P10-201ENST00000384764 102 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL5A1P20908 BTF3L4P1-201ENST00000413813 468 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AL353777.1-201ENST00000425552 326 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 AC027124.2-201ENST00000428249 105 ntBASIC1.74□□□□□ -2.13
COL5A1P20908 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.74□□□□□ -2.13
COL5A1P20908 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.74□□□□□ -2.13
COL5A1P20908 AL021397.1-201ENST00000451806 248 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms