Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 MIR301A-201ENST00000385261 86 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 Y_RNA.598-201ENST00000410480 95 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AF274854.1-201ENST00000413236 615 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.36□□□□□ -2.03
XRCC1P18887 AL353729.1-201ENST00000425044 720 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.36□□□□□ -2.03
XRCC1P18887 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.36□□□□□ -2.03
XRCC1P18887 COX6CP12-201ENST00000446748 202 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.36□□□□□ -2.03
XRCC1P18887 KATNBL1P6-201ENST00000453433 915 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RN7SL429P-201ENST00000479090 223 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.36□□□□□ -2.03
XRCC1P18887 MTND1P3-201ENST00000484956 952 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RN7SL489P-201ENST00000486185 223 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RN7SL327P-201ENST00000488659 223 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
XRCC1P18887 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RNA5SP24-201ENST00000516478 95 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 SNORD19.2-201ENST00000516978 73 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RNA5SP337-201ENST00000517007 109 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC087241.2-201ENST00000535801 324 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.36□□□□□ -2.03
XRCC1P18887 AC145350.1-201ENST00000567426 208 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC103810.1-201ENST00000579873 453 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC011890.2-201ENST00000613393 294 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 RN7SL853P-201ENST00000617250 223 ntBASIC2.36□□□□□ -2.03
XRCC1P18887 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.36□□□□□ -2.03
XRCC1P18887 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XRCC1P18887 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
XRCC1P18887 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.35□□□□□ -2.03
XRCC1P18887 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
XRCC1P18887 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
XRCC1P18887 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
XRCC1P18887 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
XRCC1P18887 AC073343.1-201ENST00000328239 651 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 SMIM11P1-201ENST00000369586 178 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
XRCC1P18887 AC007064.1-201ENST00000412238 351 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.35□□□□□ -2.03
XRCC1P18887 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
XRCC1P18887 AC092447.3-201ENST00000426027 686 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AL356583.2-201ENST00000426536 280 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
XRCC1P18887 RPS15AP7-201ENST00000439294 405 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 BRK1P2-201ENST00000442875 223 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC009296.1-201ENST00000443146 155 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 RPL32P28-201ENST00000443577 397 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 HMGN2P10-201ENST00000448085 265 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 TRBV1-201ENST00000476502 284 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.35□□□□□ -2.03
XRCC1P18887 AC010587.1-201ENST00000505809 469 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 FABP5P5-201ENST00000515537 406 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 RNU6-759P-201ENST00000516740 103 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.35□□□□□ -2.03
XRCC1P18887 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.35□□□□□ -2.03
XRCC1P18887 AC108479.2-201ENST00000617314 601 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
XRCC1P18887 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
XRCC1P18887 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
XRCC1P18887 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
XRCC1P18887 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
XRCC1P18887 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.34□□□□□ -2.03
XRCC1P18887 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.34□□□□□ -2.03
XRCC1P18887 AL591704.1-201ENST00000432574 275 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 RPL7P34-201ENST00000433316 712 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 USP9YP15-201ENST00000442391 422 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 RPS15AP34-201ENST00000487776 387 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.34□□□□□ -2.03
XRCC1P18887 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC098591.2-201ENST00000510152 315 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.34□□□□□ -2.03
XRCC1P18887 Y_RNA.672-201ENST00000516289 104 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 SNORA31.18-201ENST00000517043 134 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.34□□□□□ -2.03
XRCC1P18887 COX6CP5-201ENST00000527162 228 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AP003181.2-201ENST00000528941 181 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 RPL21P5-201ENST00000554662 472 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC021739.1-201ENST00000559631 174 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC135628.1-201ENST00000568867 534 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 MYL12BP1-201ENST00000569826 507 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 ROCK1P1-201ENST00000573767 549 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
XRCC1P18887 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
XRCC1P18887 AC007938.3-201ENST00000604965 623 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC103810.6-201ENST00000606708 136 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AP002360.4-201ENST00000606980 481 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC135507.1-201ENST00000607214 561 ntBASIC2.34□□□□□ -2.03
XRCC1P18887 AC064859.1-201ENST00000624741 174 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms