Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.04□□□□□ -1.76
ATF4P18848 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATF4P18848 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
ATF4P18848 RBBP8P1-201ENST00000449447 1844 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU4-9P-201ENST00000364951 139 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU6-1222P-201ENST00000384615 107 ntBASIC4.03□□□□□ -1.76
ATF4P18848 MIR589-201ENST00000385238 99 ntBASIC4.03□□□□□ -1.76
ATF4P18848 MIR147B-201ENST00000390185 80 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU6-750P-201ENST00000390946 107 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU6-101P-201ENST00000410323 104 ntBASIC4.03□□□□□ -1.76
ATF4P18848 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
ATF4P18848 EIF4HP2-201ENST00000424380 563 ntBASIC4.03□□□□□ -1.76
ATF4P18848 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 AL031659.1-201ENST00000447075 539 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AL353705.4-201ENST00000449661 238 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RPS21P4-201ENST00000487122 248 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.03□□□□□ -1.76
ATF4P18848 MIR2114-201ENST00000516645 80 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU4-77P-201ENST00000516692 156 ntBASIC4.03□□□□□ -1.76
ATF4P18848 RNU6-1137P-201ENST00000517073 99 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AC009812.2-201ENST00000517657 457 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.03□□□□□ -1.76
ATF4P18848 HMGB1P40-201ENST00000525121 540 ntBASIC4.03□□□□□ -1.76
ATF4P18848 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 AC060766.3-201ENST00000591442 263 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
ATF4P18848 AC100812.1-201ENST00000607622 580 ntBASIC4.03□□□□□ -1.76
ATF4P18848 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.03□□□□□ -1.76
ATF4P18848 MTND5P16-201ENST00000460269 1703 ntBASIC4.03□□□□□ -1.76
ATF4P18848 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATF4P18848 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATF4P18848 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.03□□□□□ -1.76
ATF4P18848 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ATF4P18848 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATF4P18848 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
ATF4P18848 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATF4P18848 RNU6-1141P-201ENST00000364520 107 ntBASIC4.02□□□□□ -1.77
ATF4P18848 RNU6-1286P-201ENST00000383871 107 ntBASIC4.02□□□□□ -1.77
ATF4P18848 Y_RNA.389-201ENST00000383924 113 ntBASIC4.02□□□□□ -1.77
ATF4P18848 SNORA16A-201ENST00000384342 137 ntBASIC4.02□□□□□ -1.77
ATF4P18848 SNORA70-201ENST00000384436 135 ntBASIC4.02□□□□□ -1.77
ATF4P18848 SNORA66-201ENST00000384792 133 ntBASIC4.02□□□□□ -1.77
ATF4P18848 SNORA69.1-201ENST00000390904 137 ntBASIC4.02□□□□□ -1.77
ATF4P18848 SPTLC1P2-201ENST00000407089 121 ntBASIC4.02□□□□□ -1.77
ATF4P18848 RNA5SP494-201ENST00000410653 129 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AL390119.1-201ENST00000440329 312 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.02□□□□□ -1.77
ATF4P18848 RN7SL172P-201ENST00000460535 303 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.02□□□□□ -1.77
ATF4P18848 AC016632.1-201ENST00000503994 196 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.02□□□□□ -1.77
ATF4P18848 RN7SKP122-201ENST00000515923 296 ntBASIC4.02□□□□□ -1.77
ATF4P18848 RNU5B-3P-201ENST00000516601 115 ntBASIC4.02□□□□□ -1.77
ATF4P18848 Y_RNA.706-201ENST00000516933 99 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.02□□□□□ -1.77
ATF4P18848 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.02□□□□□ -1.77
ATF4P18848 AC016256.1-201ENST00000547971 354 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.02□□□□□ -1.77
ATF4P18848 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATF4P18848 AC104581.2-201ENST00000572227 430 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.02□□□□□ -1.77
ATF4P18848 AC016727.2-201ENST00000603988 621 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AC006077.1-201ENST00000604746 343 ntBASIC4.02□□□□□ -1.77
ATF4P18848 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AC096772.1-201ENST00000609146 564 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AL391261.4-201ENST00000616012 481 ntBASIC4.02□□□□□ -1.77
ATF4P18848 AC007792.1-201ENST00000623023 402 ntBASIC4.02□□□□□ -1.77
ATF4P18848 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.02□□□□□ -1.77
ATF4P18848 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.02□□□□□ -1.77
ATF4P18848 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.02□□□□□ -1.77
ATF4P18848 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATF4P18848 MTND5P27-201ENST00000428871 1720 ntBASIC4.01□□□□□ -1.77
ATF4P18848 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ATF4P18848 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATF4P18848 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATF4P18848 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 AC010300.1-201ENST00000600671 5134 ntBASIC4.01□□□□□ -1.77
ATF4P18848 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATF4P18848 RNA5SP234-201ENST00000363916 119 ntBASIC4.01□□□□□ -1.77
ATF4P18848 SNORA74A-201ENST00000364089 198 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RNU4-42P-201ENST00000364738 142 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RNU1-64P-201ENST00000365443 163 ntBASIC4.01□□□□□ -1.77
ATF4P18848 Y_RNA.527-201ENST00000384573 102 ntBASIC4.01□□□□□ -1.77
ATF4P18848 MIR767-201ENST00000390228 109 ntBASIC4.01□□□□□ -1.77
ATF4P18848 SNORA12.2-201ENST00000391040 156 ntBASIC4.01□□□□□ -1.77
ATF4P18848 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 AL353752.1-201ENST00000454946 260 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RN7SL610P-201ENST00000463845 291 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RN7SL329P-201ENST00000467740 299 ntBASIC4.01□□□□□ -1.77
ATF4P18848 RN7SL481P-201ENST00000477764 299 ntBASIC4.01□□□□□ -1.77
ATF4P18848 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.01□□□□□ -1.77
ATF4P18848 AC021146.2-201ENST00000504736 556 ntBASIC4.01□□□□□ -1.77
ATF4P18848 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
ATF4P18848 HSPE1P4-201ENST00000550617 308 ntBASIC4.01□□□□□ -1.77
ATF4P18848 AC105137.2-201ENST00000569073 466 ntBASIC4.01□□□□□ -1.77
ATF4P18848 AC090897.2-201ENST00000581715 130 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms