Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC006023.1-201ENST00000603944 259 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AL359547.2-201ENST00000615810 418 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 CU459211.1-201ENST00000635667 749 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFRAP16234 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
PDGFRAP16234 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFRAP16234 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.78□□□□□ -1.96
PDGFRAP16234 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFRAP16234 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFRAP16234 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFRAP16234 Y_RNA.22-201ENST00000362492 102 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 AL356057.3-201ENST00000402607 340 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 RNA5SP184-201ENST00000411071 108 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 NUP35P1-201ENST00000422734 947 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFRAP16234 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFRAP16234 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFRAP16234 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFRAP16234 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFRAP16234 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.78□□□□□ -1.96
PDGFRAP16234 RPL9P33-201ENST00000484311 566 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 RNU6-1183P-201ENST00000517054 60 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 RNU6-1220P-201ENST00000517126 108 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 SCARNA11.3-201ENST00000517276 130 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 AC025755.1-201ENST00000521306 278 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 MTND2P38-201ENST00000522536 667 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.78□□□□□ -1.96
PDGFRAP16234 SEPT7P9-203ENST00000604116 343 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 AC022079.1-201ENST00000621546 602 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 AC110994.2-201ENST00000635481 492 ntBASIC2.78□□□□□ -1.96
PDGFRAP16234 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDGFRAP16234 AC103710.2-202ENST00000641454 2853 ntBASIC2.78□□□□□ -1.97
PDGFRAP16234 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.78□□□□□ -1.97
PDGFRAP16234 TEX21P-201ENST00000447107 1476 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AL139095.1-201ENST00000404326 391 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 USP9YP6-201ENST00000413550 854 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 MTND3P17-201ENST00000416968 344 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC063976.3-201ENST00000426849 329 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 ISCA1P6-201ENST00000427740 390 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL353706.1-201ENST00000436728 494 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFRAP16234 RPS15AP7-201ENST00000439294 405 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 MTND2P4-201ENST00000445034 1004 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 FABP5P13-201ENST00000452144 328 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL109933.2-201ENST00000452651 260 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFRAP16234 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.77□□□□□ -1.97
PDGFRAP16234 SCARNA24.1-201ENST00000516465 137 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 Y_RNA.688-201ENST00000516565 95 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC090572.1-201ENST00000519251 160 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AP003072.2-201ENST00000527756 676 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AP002453.2-201ENST00000533503 320 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC006199.1-201ENST00000548728 219 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL157871.3-201ENST00000557231 293 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC024619.4-201ENST00000580924 316 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PDGFRAP16234 AL589743.7-201ENST00000612637 233 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 AL158063.1-201ENST00000615349 536 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 U6.99-201ENST00000637524 83 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
PDGFRAP16234 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
PDGFRAP16234 ADAM3A-203ENST00000461344 2157 ntBASIC2.77□□□□□ -1.97
PDGFRAP16234 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
PDGFRAP16234 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
PDGFRAP16234 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 SNORA24.1-201ENST00000384401 135 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 MIR34A-201ENST00000385130 110 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 RN7SKP142-201ENST00000411236 328 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 RNU6-195P-201ENST00000411352 109 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AP000936.2-201ENST00000447151 681 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC003071.1-201ENST00000451219 789 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AP000852.1-201ENST00000472460 573 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 UBE2DNL-203ENST00000474922 222 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 RPS27AP9-201ENST00000477681 438 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AC108078.2-201ENST00000510750 236 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC091965.2-201ENST00000512324 613 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AC022447.1-201ENST00000515358 464 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 RNU5F-8P-201ENST00000515941 111 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 SCARNA17.1-201ENST00000516211 143 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 SCARNA17.2-201ENST00000516334 143 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 RNU6-572P-201ENST00000516724 80 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 SNORA18.6-201ENST00000516792 115 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
PDGFRAP16234 MIR4782-201ENST00000577987 79 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 MIR5194-201ENST00000582634 120 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms