Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC008127.2-201ENST00000549925 1075 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.54□□□□□ -2.16
COL11A1P12107 AC109446.2-201ENST00000567872 497 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC090616.3-201ENST00000582184 217 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 MIR4637-201ENST00000582405 84 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL11A1P12107 AC009159.2-201ENST00000617603 606 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AP000484.1-201ENST00000620067 1252 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL11A1P12107 RNU5D-1-201ENST00000363299 116 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 RNU6-1214P-201ENST00000363650 109 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 RNU5A-2P-201ENST00000384337 116 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AL139098.1-201ENST00000407291 389 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC068533.2-201ENST00000411872 306 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC074117.2-201ENST00000417130 397 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.54□□□□□ -2.16
COL11A1P12107 AC098614.2-201ENST00000426040 255 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC024082.2-201ENST00000434771 238 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC092427.1-201ENST00000439177 601 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 SUMO2P2-201ENST00000456482 255 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC005410.1-202ENST00000460347 485 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.54□□□□□ -2.16
COL11A1P12107 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.54□□□□□ -2.16
COL11A1P12107 HMGB3P3-201ENST00000510526 400 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 LTV1P1-201ENST00000510683 1237 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.54□□□□□ -2.16
COL11A1P12107 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.54□□□□□ -2.16
COL11A1P12107 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.54□□□□□ -2.16
COL11A1P12107 MIR5194-201ENST00000582634 120 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.54□□□□□ -2.16
COL11A1P12107 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.54□□□□□ -2.16
COL11A1P12107 AC063944.3-201ENST00000609969 533 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 AC092106.3-201ENST00000611308 722 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 PVT1_3.1-201ENST00000620853 95 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
COL11A1P12107 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.54□□□□□ -2.16
COL11A1P12107 MIR6767-201ENST00000637302 66 ntBASIC1.54□□□□□ -2.16
COL11A1P12107 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
COL11A1P12107 CDR1-202ENST00000625883 1485 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 CENPCP1-201ENST00000533085 2578 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 SNORD114-22-201ENST00000365423 72 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 SNORD82-201ENST00000365530 70 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AL593851.1-201ENST00000426171 157 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 USP9YP11-201ENST00000427537 717 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 MICF-203ENST00000432679 129 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 COX7BP2-201ENST00000437976 242 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 VN1R10P-201ENST00000447106 875 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.53□□□□□ -2.16
COL11A1P12107 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COL11A1P12107 MTCYBP35-201ENST00000503630 1137 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
COL11A1P12107 MRPS36P2-201ENST00000512569 299 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.53□□□□□ -2.16
COL11A1P12107 RNU6-311P-201ENST00000516224 102 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 RNU6-1223P-201ENST00000517124 104 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.53□□□□□ -2.16
COL11A1P12107 AP003461.1-201ENST00000528866 78 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 OR4R1P-201ENST00000529879 463 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 ELOCP32-201ENST00000548625 324 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 HSPE1P3-201ENST00000559254 309 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.53□□□□□ -2.16
COL11A1P12107 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.53□□□□□ -2.16
COL11A1P12107 LARP7P2-201ENST00000575306 125 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 RPS15AP11-201ENST00000594193 385 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC093424.1-201ENST00000604999 338 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC012443.1-201ENST00000605605 231 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC080013.4-201ENST00000607624 649 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC087683.2-201ENST00000611384 326 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC006329.2-201ENST00000611491 394 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COL11A1P12107 AC009318.4-201ENST00000620496 486 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 UCA1.1-201ENST00000620952 75 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AC004009.2-201ENST00000623016 728 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 AL356596.1-201ENST00000624230 379 ntBASIC1.53□□□□□ -2.16
COL11A1P12107 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.53□□□□□ -2.16
COL11A1P12107 CR848007.1-201ENST00000442354 1699 ntBASIC1.53□□□□□ -2.17
COL11A1P12107 AP000776.1-201ENST00000530032 1663 ntBASIC1.53□□□□□ -2.17
COL11A1P12107 AL079343.1-201ENST00000572358 1771 ntBASIC1.53□□□□□ -2.17
COL11A1P12107 AL391994.1-201ENST00000254724 282 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 Y_RNA.205-201ENST00000364128 113 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL023807.1-201ENST00000407932 359 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 U3.40-201ENST00000408706 208 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 TPMTP2-201ENST00000414372 726 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.52□□□□□ -2.17
COL11A1P12107 XKRYP1-201ENST00000423438 492 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.52□□□□□ -2.17
COL11A1P12107 RPL27AP8-201ENST00000424277 446 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AL590233.1-201ENST00000430017 456 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 XKRYP2-201ENST00000432915 492 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 FGF7P5-201ENST00000441829 291 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 COX6CP12-201ENST00000446748 202 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 AC087588.1-201ENST00000462203 316 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 PABPC1P3-201ENST00000469174 459 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 RNU6-1225P-201ENST00000516336 65 ntBASIC1.52□□□□□ -2.17
COL11A1P12107 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms