Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR4472-2-201ENST00000582069 67 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC073410.2-201ENST00000603240 332 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC098826.3-201ENST00000603823 466 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AL672167.1-203ENST00000641299 2975 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 AC139713.2-215ENST00000641428 5037 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 MAPK10-303ENST00000641324 3959 ntBASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSB-PGBD3P0DP91 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AC106871.1-201ENST00000568324 3102 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 SNORA63.1-201ENST00000362493 131 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 RNU4-50P-201ENST00000364361 141 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-125P-201ENST00000384505 107 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 MIR921-201ENST00000401133 56 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-174P-201ENST00000410406 106 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AC091390.3-201ENST00000426478 338 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AL360271.2-201ENST00000447710 161 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 RPL7P49-201ENST00000471402 708 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 SUMO2P6-201ENST00000505273 288 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 SCARNA15.2-201ENST00000516409 127 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AF186190.1-201ENST00000517470 480 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AC104576.1-201ENST00000524225 88 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 VN1R91P-201ENST00000594377 169 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 AL354798.1-201ENST00000622505 329 ntBASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
CSB-PGBD3P0DP91 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1167P-201ENST00000363227 94 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 RNU2-25P-201ENST00000411041 191 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 HSPE1P12-201ENST00000412576 301 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AC018437.1-201ENST00000492214 406 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AC104164.2-201ENST00000496953 495 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 Vault.1-201ENST00000516474 102 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.703-201ENST00000516846 111 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AL121772.2-201ENST00000614331 297 ntBASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSB-PGBD3P0DP91 RNY1-201ENST00000364228 113 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 SNORD113-1-201ENST00000365321 69 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1329P-201ENST00000365664 107 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.464-201ENST00000384282 110 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-1203P-201ENST00000410703 110 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-130P-201ENST00000411112 103 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 UBE2D3P2-201ENST00000424409 445 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 PCMTD1P1-201ENST00000455560 355 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 MTND3P25-201ENST00000509243 135 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AC109329.1-201ENST00000518744 317 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 RPL23AP97-201ENST00000568955 471 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AP002826.1-201ENST00000608835 315 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 MIR7151-201ENST00000617477 60 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 AC087190.4-201ENST00000574616 8334 ntBASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CSB-PGBD3P0DP91 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNU6-545P-201ENST00000362681 104 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.65-201ENST00000362846 100 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 Y_RNA.84-201ENST00000363011 104 ntBASIC5.53□□□□□ -1.52
CSB-PGBD3P0DP91 RNY1P16-201ENST00000363063 111 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms