Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.69□□□□□ -1.98
VIMP08670 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
VIMP08670 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VIMP08670 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VIMP08670 RNU6-61P-201ENST00000365528 109 ntBASIC2.69□□□□□ -1.98
VIMP08670 SNORA75B-201ENST00000384053 137 ntBASIC2.69□□□□□ -1.98
VIMP08670 MIR34B-201ENST00000385076 84 ntBASIC2.69□□□□□ -1.98
VIMP08670 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
VIMP08670 MIR1302-8-201ENST00000408342 128 ntBASIC2.69□□□□□ -1.98
VIMP08670 RNA5SP120-201ENST00000410900 112 ntBASIC2.69□□□□□ -1.98
VIMP08670 RNU6-1328P-201ENST00000410938 106 ntBASIC2.69□□□□□ -1.98
VIMP08670 USP9YP6-201ENST00000413550 854 ntBASIC2.69□□□□□ -1.98
VIMP08670 MYL8P-204ENST00000431574 518 ntBASIC2.69□□□□□ -1.98
VIMP08670 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.69□□□□□ -1.98
VIMP08670 USP9YP29-201ENST00000445112 563 ntBASIC2.69□□□□□ -1.98
VIMP08670 MTND1P27-201ENST00000451117 902 ntBASIC2.69□□□□□ -1.98
VIMP08670 AC092001.1-201ENST00000453012 261 ntBASIC2.69□□□□□ -1.98
VIMP08670 AC133134.1-201ENST00000466800 359 ntBASIC2.69□□□□□ -1.98
VIMP08670 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.69□□□□□ -1.98
VIMP08670 AC126389.1-201ENST00000477436 290 ntBASIC2.69□□□□□ -1.98
VIMP08670 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.69□□□□□ -1.98
VIMP08670 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.69□□□□□ -1.98
VIMP08670 RBBP4P6-201ENST00000508098 202 ntBASIC2.69□□□□□ -1.98
VIMP08670 AC022447.1-201ENST00000515358 464 ntBASIC2.69□□□□□ -1.98
VIMP08670 SNORA31.6-201ENST00000516241 130 ntBASIC2.69□□□□□ -1.98
VIMP08670 SNORA74D-201ENST00000516404 141 ntBASIC2.69□□□□□ -1.98
VIMP08670 AC009812.2-201ENST00000517657 457 ntBASIC2.69□□□□□ -1.98
VIMP08670 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.69□□□□□ -1.98
VIMP08670 MTCYBP20-201ENST00000524239 1129 ntBASIC2.69□□□□□ -1.98
VIMP08670 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.69□□□□□ -1.98
VIMP08670 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.69□□□□□ -1.98
VIMP08670 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.69□□□□□ -1.98
VIMP08670 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.69□□□□□ -1.98
VIMP08670 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.69□□□□□ -1.98
VIMP08670 MIR3913-1-201ENST00000577744 102 ntBASIC2.69□□□□□ -1.98
VIMP08670 AL137847.3-201ENST00000611521 109 ntBASIC2.69□□□□□ -1.98
VIMP08670 MIR6075-201ENST00000620782 95 ntBASIC2.69□□□□□ -1.98
VIMP08670 AL157786.1-207ENST00000627771 695 ntBASIC2.69□□□□□ -1.98
VIMP08670 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.69□□□□□ -1.98
VIMP08670 CKAP2P1-201ENST00000555477 2049 ntBASIC2.68□□□□□ -1.98
VIMP08670 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VIMP08670 RNU6-898P-201ENST00000365627 104 ntBASIC2.68□□□□□ -1.98
VIMP08670 RNU6-395P-201ENST00000365662 106 ntBASIC2.68□□□□□ -1.98
VIMP08670 RNU6-166P-201ENST00000384371 107 ntBASIC2.68□□□□□ -1.98
VIMP08670 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL160275.3-201ENST00000423876 471 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.68□□□□□ -1.98
VIMP08670 AL078601.1-201ENST00000444542 271 ntBASIC2.68□□□□□ -1.98
VIMP08670 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
VIMP08670 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
VIMP08670 AL121769.1-201ENST00000469473 401 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL358832.1-201ENST00000497800 389 ntBASIC2.68□□□□□ -1.98
VIMP08670 GZMAP1-201ENST00000503054 631 ntBASIC2.68□□□□□ -1.98
VIMP08670 FAM92A1P2-202ENST00000504766 877 ntBASIC2.68□□□□□ -1.98
VIMP08670 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.68□□□□□ -1.98
VIMP08670 AC116562.3-201ENST00000506136 177 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.68□□□□□ -1.98
VIMP08670 MTCO3P28-201ENST00000513351 515 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC008885.1-201ENST00000514930 301 ntBASIC2.68□□□□□ -1.98
VIMP08670 SNORA67.7-201ENST00000516664 135 ntBASIC2.68□□□□□ -1.98
VIMP08670 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.68□□□□□ -1.98
VIMP08670 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.68□□□□□ -1.98
VIMP08670 AP001646.1-201ENST00000527936 915 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC068587.5-201ENST00000528506 175 ntBASIC2.68□□□□□ -1.98
VIMP08670 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.68□□□□□ -1.98
VIMP08670 LINC00933-203ENST00000559812 219 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
VIMP08670 AC098848.2-201ENST00000588023 330 ntBASIC2.68□□□□□ -1.98
VIMP08670 DEFB131E-202ENST00000602581 683 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC245014.2-201ENST00000603689 287 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL645944.1-201ENST00000603857 493 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL022154.1-201ENST00000604698 785 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC246785.4-201ENST00000605374 287 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL109618.2-201ENST00000605527 211 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC087752.4-201ENST00000605911 462 ntBASIC2.68□□□□□ -1.98
VIMP08670 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
VIMP08670 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.68□□□□□ -1.98
VIMP08670 AC025034.2-201ENST00000623264 286 ntBASIC2.68□□□□□ -1.98
VIMP08670 AC093648.1-201ENST00000623546 606 ntBASIC2.68□□□□□ -1.98
VIMP08670 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.68□□□□□ -1.98
VIMP08670 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
VIMP08670 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VIMP08670 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VIMP08670 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VIMP08670 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.67□□□□□ -1.98
VIMP08670 RNU6-179P-201ENST00000363350 107 ntBASIC2.67□□□□□ -1.98
VIMP08670 MIR144-201ENST00000384886 86 ntBASIC2.67□□□□□ -1.98
VIMP08670 AL138885.1-201ENST00000405921 675 ntBASIC2.67□□□□□ -1.98
VIMP08670 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.67□□□□□ -1.98
VIMP08670 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.67□□□□□ -1.98
VIMP08670 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.67□□□□□ -1.98
VIMP08670 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 GPR143P-201ENST00000434155 205 ntBASIC2.67□□□□□ -1.98
VIMP08670 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.67□□□□□ -1.98
VIMP08670 KATNBL1P3-201ENST00000443475 909 ntBASIC2.67□□□□□ -1.98
VIMP08670 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 FAM133DP-201ENST00000464802 691 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms