Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 AC004972.1-201ENST00000623934 2209 ntBASIC3.3□□□□□ -1.88
MMP3P08254 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MMP3P08254 Y_RNA.86-201ENST00000363020 111 ntBASIC3.3□□□□□ -1.88
MMP3P08254 Y_RNA.160-201ENST00000363677 92 ntBASIC3.3□□□□□ -1.88
MMP3P08254 RNU5E-4P-201ENST00000364931 120 ntBASIC3.3□□□□□ -1.88
MMP3P08254 RNU6-867P-201ENST00000364956 107 ntBASIC3.3□□□□□ -1.88
MMP3P08254 RNU6-116P-201ENST00000384042 109 ntBASIC3.3□□□□□ -1.88
MMP3P08254 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
MMP3P08254 MIR184-201ENST00000384962 84 ntBASIC3.3□□□□□ -1.88
MMP3P08254 MIR493-201ENST00000385254 89 ntBASIC3.3□□□□□ -1.88
MMP3P08254 CISD1P1-201ENST00000393907 327 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AL078595.1-201ENST00000404458 226 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AL645937.1-202ENST00000421799 937 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
MMP3P08254 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.3□□□□□ -1.88
MMP3P08254 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.3□□□□□ -1.88
MMP3P08254 MTND4P25-201ENST00000441039 533 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.3□□□□□ -1.88
MMP3P08254 RPL23AP14-201ENST00000468281 468 ntBASIC3.3□□□□□ -1.88
MMP3P08254 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.3□□□□□ -1.88
MMP3P08254 TTC39CP1-201ENST00000512513 755 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC105417.1-201ENST00000514691 285 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.3□□□□□ -1.88
MMP3P08254 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
MMP3P08254 RNU6-1038P-201ENST00000516516 104 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.3□□□□□ -1.88
MMP3P08254 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.3□□□□□ -1.88
MMP3P08254 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
MMP3P08254 MIR3690-201ENST00000580266 75 ntBASIC3.3□□□□□ -1.88
MMP3P08254 MIR3162-201ENST00000581818 82 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC005730.3-201ENST00000583067 366 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.3□□□□□ -1.88
MMP3P08254 DISC2.1-201ENST00000612827 205 ntBASIC3.3□□□□□ -1.88
MMP3P08254 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.3□□□□□ -1.88
MMP3P08254 AC100810.6-201ENST00000638068 285 ntBASIC3.3□□□□□ -1.88
MMP3P08254 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
MMP3P08254 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MMP3P08254 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
MMP3P08254 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
MMP3P08254 OR4G1P-203ENST00000641984 1631 ntBASIC3.3□□□□□ -1.88
MMP3P08254 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.29□□□□□ -1.88
MMP3P08254 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
MMP3P08254 RNU1-75P-201ENST00000347264 129 ntBASIC3.29□□□□□ -1.88
MMP3P08254 SNORA72.1-201ENST00000363485 129 ntBASIC3.29□□□□□ -1.88
MMP3P08254 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MMP3P08254 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MMP3P08254 RNU6-550P-201ENST00000391057 101 ntBASIC3.29□□□□□ -1.88
MMP3P08254 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
MMP3P08254 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 AL139039.1-201ENST00000401900 692 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AL606923.1-201ENST00000406616 190 ntBASIC3.29□□□□□ -1.88
MMP3P08254 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC138393.2-201ENST00000414742 246 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 SNRPEP10-201ENST00000420249 274 ntBASIC3.29□□□□□ -1.88
MMP3P08254 RPL7P46-201ENST00000425129 740 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AL591212.2-201ENST00000433923 257 ntBASIC3.29□□□□□ -1.88
MMP3P08254 RPL36AP6-201ENST00000435770 321 ntBASIC3.29□□□□□ -1.88
MMP3P08254 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 RPL21P104-201ENST00000464143 478 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 MTCO3P9-201ENST00000506989 781 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC117522.3-201ENST00000507974 584 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 AL359273.1-201ENST00000510918 627 ntBASIC3.29□□□□□ -1.88
MMP3P08254 RNU4-29P-201ENST00000515943 174 ntBASIC3.29□□□□□ -1.88
MMP3P08254 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
MMP3P08254 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.29□□□□□ -1.88
MMP3P08254 AC118273.2-201ENST00000532092 465 ntBASIC3.29□□□□□ -1.88
MMP3P08254 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 MIR4319-201ENST00000577285 85 ntBASIC3.29□□□□□ -1.88
MMP3P08254 NRBF2P5-201ENST00000603087 788 ntBASIC3.29□□□□□ -1.88
MMP3P08254 ATP1B3P1-201ENST00000605365 821 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
MMP3P08254 RMST_8.1-201ENST00000610287 165 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AL365204.3-201ENST00000612448 685 ntBASIC3.29□□□□□ -1.88
MMP3P08254 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
MMP3P08254 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.29□□□□□ -1.88
MMP3P08254 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.29□□□□□ -1.88
MMP3P08254 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.29□□□□□ -1.88
MMP3P08254 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
MMP3P08254 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.29□□□□□ -1.88
MMP3P08254 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MMP3P08254 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 MTND4P35-201ENST00000604257 1375 ntBASIC3.28□□□□□ -1.88
MMP3P08254 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MMP3P08254 FGF7P8-201ENST00000402994 292 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AL513331.1-201ENST00000411908 397 ntBASIC3.28□□□□□ -1.88
MMP3P08254 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms