Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR301A-201ENST00000385261 86 ntBASIC3.08□□□□□ -1.92
RB1P06400 RNU2-52P-201ENST00000410680 190 ntBASIC3.08□□□□□ -1.92
RB1P06400 NDUFS5P4-201ENST00000412983 318 ntBASIC3.08□□□□□ -1.92
RB1P06400 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 SKA2P1-201ENST00000425592 390 ntBASIC3.08□□□□□ -1.92
RB1P06400 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RB1P06400 USP9YP14-201ENST00000430663 563 ntBASIC3.08□□□□□ -1.92
RB1P06400 VN1R108P-201ENST00000431580 830 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 RPL37P4-201ENST00000448908 268 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 AC022364.2-201ENST00000457963 554 ntBASIC3.08□□□□□ -1.92
RB1P06400 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.08□□□□□ -1.92
RB1P06400 RPS3AP17-201ENST00000472594 777 ntBASIC3.08□□□□□ -1.92
RB1P06400 TRBV12-1-201ENST00000479785 344 ntBASIC3.08□□□□□ -1.92
RB1P06400 RPS29P20-201ENST00000489592 171 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC023194.1-201ENST00000493084 308 ntBASIC3.08□□□□□ -1.92
RB1P06400 RPS27AP10-201ENST00000496103 208 ntBASIC3.08□□□□□ -1.92
RB1P06400 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.08□□□□□ -1.92
RB1P06400 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.08□□□□□ -1.92
RB1P06400 AC117522.3-201ENST00000507974 584 ntBASIC3.08□□□□□ -1.92
RB1P06400 RNU4-29P-201ENST00000515943 174 ntBASIC3.08□□□□□ -1.92
RB1P06400 RNU6-123P-201ENST00000516163 102 ntBASIC3.08□□□□□ -1.92
RB1P06400 SNORD27.1-201ENST00000516319 72 ntBASIC3.08□□□□□ -1.92
RB1P06400 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
RB1P06400 ADI1P3-201ENST00000549509 470 ntBASIC3.08□□□□□ -1.92
RB1P06400 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
RB1P06400 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
RB1P06400 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RB1P06400 AC103987.3-201ENST00000582071 292 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.08□□□□□ -1.92
RB1P06400 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.08□□□□□ -1.92
RB1P06400 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.08□□□□□ -1.92
RB1P06400 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
RB1P06400 Z84480.1-201ENST00000605131 311 ntBASIC3.08□□□□□ -1.92
RB1P06400 AL158032.1-201ENST00000605401 106 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC104073.3-201ENST00000610942 955 ntBASIC3.08□□□□□ -1.92
RB1P06400 AC011939.3-201ENST00000613686 466 ntBASIC3.08□□□□□ -1.92
RB1P06400 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RB1P06400 AC103710.2-202ENST00000641454 2853 ntBASIC3.08□□□□□ -1.92
RB1P06400 MTND5P17-201ENST00000418405 1603 ntBASIC3.08□□□□□ -1.92
RB1P06400 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RB1P06400 AC099654.7-201ENST00000635788 2127 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC008669.1-201ENST00000565823 2178 ntBASIC3.07□□□□□ -1.92
RB1P06400 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RB1P06400 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RB1P06400 RNU1-73P-201ENST00000383971 164 ntBASIC3.07□□□□□ -1.92
RB1P06400 MIR1-2-201ENST00000384961 85 ntBASIC3.07□□□□□ -1.92
RB1P06400 RNA5SP274-201ENST00000410484 108 ntBASIC3.07□□□□□ -1.92
RB1P06400 RNU2-66P-201ENST00000410650 161 ntBASIC3.07□□□□□ -1.92
RB1P06400 RNU6-387P-201ENST00000411331 105 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.07□□□□□ -1.92
RB1P06400 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.07□□□□□ -1.92
RB1P06400 AC010975.2-201ENST00000427781 588 ntBASIC3.07□□□□□ -1.92
RB1P06400 HMGB1P9-201ENST00000429856 646 ntBASIC3.07□□□□□ -1.92
RB1P06400 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.07□□□□□ -1.92
RB1P06400 NIPA2P5-201ENST00000452282 464 ntBASIC3.07□□□□□ -1.92
RB1P06400 RPS15AP34-201ENST00000487776 387 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC139453.3-201ENST00000493276 369 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.07□□□□□ -1.92
RB1P06400 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RB1P06400 AC009901.1-201ENST00000506703 541 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC010493.1-201ENST00000513479 292 ntBASIC3.07□□□□□ -1.92
RB1P06400 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
RB1P06400 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.07□□□□□ -1.92
RB1P06400 AC009063.1-201ENST00000563342 702 ntBASIC3.07□□□□□ -1.92
RB1P06400 Z99129.1-201ENST00000612510 255 ntBASIC3.07□□□□□ -1.92
RB1P06400 AC009161.2-201ENST00000624626 138 ntBASIC3.07□□□□□ -1.92
RB1P06400 AL157786.1-207ENST00000627771 695 ntBASIC3.07□□□□□ -1.92
RB1P06400 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.07□□□□□ -1.92
RB1P06400 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
RB1P06400 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.07□□□□□ -1.92
RB1P06400 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RB1P06400 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
RB1P06400 RNU6-859P-201ENST00000362728 107 ntBASIC3.06□□□□□ -1.92
RB1P06400 RNU6-623P-201ENST00000363143 105 ntBASIC3.06□□□□□ -1.92
RB1P06400 RNU1-105P-201ENST00000363470 161 ntBASIC3.06□□□□□ -1.92
RB1P06400 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RB1P06400 MIR454-201ENST00000390180 115 ntBASIC3.06□□□□□ -1.92
RB1P06400 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RB1P06400 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.06□□□□□ -1.92
RB1P06400 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.06□□□□□ -1.92
RB1P06400 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.06□□□□□ -1.92
RB1P06400 MORF4L1P6-201ENST00000418771 268 ntBASIC3.06□□□□□ -1.92
RB1P06400 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.06□□□□□ -1.92
RB1P06400 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.06□□□□□ -1.92
RB1P06400 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
RB1P06400 AC108078.1-201ENST00000508073 725 ntBASIC3.06□□□□□ -1.92
RB1P06400 RAC1P5-201ENST00000512182 576 ntBASIC3.06□□□□□ -1.92
RB1P06400 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.06□□□□□ -1.92
RB1P06400 AC022634.1-201ENST00000520765 532 ntBASIC3.06□□□□□ -1.92
RB1P06400 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.06□□□□□ -1.92
RB1P06400 AGGF1P4-201ENST00000568249 801 ntBASIC3.06□□□□□ -1.92
RB1P06400 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.06□□□□□ -1.92
RB1P06400 AC087241.4-201ENST00000612441 480 ntBASIC3.06□□□□□ -1.92
RB1P06400 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RB1P06400 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms