Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AC123904.2-201ENST00000548059 300 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 MIR3146-201ENST00000580367 79 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.79□□□□□ -2.12
MT-ND4P03905 KC877982.1-201ENST00000602313 470 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.79□□□□□ -2.12
MT-ND4P03905 AC105148.1-201ENST00000604961 409 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC011939.3-201ENST00000613686 466 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC010678.1-201ENST00000614118 713 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 DUXAP9-208ENST00000622815 614 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 AC091932.3-201ENST00000624223 323 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
MT-ND4P03905 MTND5P6-201ENST00000422338 1798 ntBASIC1.79□□□□□ -2.12
MT-ND4P03905 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 RNA5SP125-201ENST00000364843 120 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MT-ND4P03905 Z98749.2-208ENST00000381646 500 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 RPS20P2-201ENST00000402520 389 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 BTF3P7-201ENST00000407097 488 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 RNU6-584P-201ENST00000410350 95 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 ELOCP17-201ENST00000414751 326 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 OR51A5P-201ENST00000415429 942 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 Z98742.2-201ENST00000431564 187 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 FABP5P14-201ENST00000437273 393 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC004383.1-201ENST00000438135 289 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 USP9YP8-201ENST00000441913 500 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC124916.1-201ENST00000444020 547 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC026801.1-201ENST00000497178 464 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 RNU6-581P-201ENST00000516214 105 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 RNU6-311P-201ENST00000516224 102 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 RNU6-1183P-201ENST00000517054 60 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 ARL2BPP2-201ENST00000550907 489 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.78□□□□□ -2.12
MT-ND4P03905 RPS3AP4-201ENST00000555161 764 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.78□□□□□ -2.12
MT-ND4P03905 MIR4765-201ENST00000585007 77 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 NRBF2P1-201ENST00000587407 859 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC245884.10-201ENST00000597355 337 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC025165.5-201ENST00000602802 578 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AP000860.1-201ENST00000605250 559 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC107952.2-201ENST00000606048 486 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AL136370.1-201ENST00000608166 691 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.78□□□□□ -2.12
MT-ND4P03905 AC016597.2-201ENST00000613256 341 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 PISRT1-201ENST00000626175 531 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 MIR7157-201ENST00000635801 60 ntBASIC1.78□□□□□ -2.12
MT-ND4P03905 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.78□□□□□ -2.13
MT-ND4P03905 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.77□□□□□ -2.13
MT-ND4P03905 AL391994.1-201ENST00000254724 282 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MT-ND4P03905 Y_RNA.97-201ENST00000363094 102 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 SNORD113-6-201ENST00000363345 75 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU6-660P-201ENST00000364566 109 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU1-91P-201ENST00000364746 163 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU1-148P-201ENST00000384472 162 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU6-19P-201ENST00000384718 107 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 U8.14-201ENST00000390843 143 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 FCF1P10-201ENST00000407590 479 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU2-36P-201ENST00000410361 191 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU4-53P-201ENST00000410828 140 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.77□□□□□ -2.13
MT-ND4P03905 RAC1P6-201ENST00000423911 575 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 MYL8P-204ENST00000431574 518 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.77□□□□□ -2.13
MT-ND4P03905 MTND4P25-201ENST00000441039 533 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 GDI2P2-201ENST00000445131 608 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.77□□□□□ -2.13
MT-ND4P03905 AC092001.1-201ENST00000453012 261 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AP001324.2-201ENST00000461163 319 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MT-ND4P03905 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.77□□□□□ -2.13
MT-ND4P03905 RPL39P36-201ENST00000490784 156 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.77□□□□□ -2.13
MT-ND4P03905 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.77□□□□□ -2.13
MT-ND4P03905 RNU2-19P-201ENST00000517288 84 ntBASIC1.77□□□□□ -2.13
MT-ND4P03905 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms