Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A1P02462 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A1P02462 AC021451.1-201ENST00000523498 1129 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A1P02462 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A1P02462 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.36□□□□□ -2.19
COL4A1P02462 AC105224.1-201ENST00000587055 421 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC007229.1-201ENST00000590455 412 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC012443.1-201ENST00000605605 231 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AL158211.4-201ENST00000606988 584 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AL121652.1-201ENST00000608851 448 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC084824.4-201ENST00000620106 731 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 AC002550.2-201ENST00000621246 394 ntBASIC1.36□□□□□ -2.19
COL4A1P02462 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A1P02462 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A1P02462 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A1P02462 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A1P02462 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A1P02462 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 RNU5E-10P-201ENST00000363506 118 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-1155P-201ENST00000363554 107 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-1078P-201ENST00000364522 103 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SNORD116.1-201ENST00000365628 92 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-878P-201ENST00000384578 110 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SNORA1.3-201ENST00000384676 136 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-1072P-201ENST00000384703 107 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-443P-201ENST00000384780 107 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU2-32P-201ENST00000411193 191 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 USP9YP13-201ENST00000417797 480 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 AC007560.1-201ENST00000426912 237 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL445687.1-201ENST00000439946 251 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNF2P1-201ENST00000442955 1010 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL078601.1-201ENST00000444542 271 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 MTCO2P25-201ENST00000447065 681 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 MTATP6P14-201ENST00000455189 673 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNA5SP233-201ENST00000459153 113 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC087343.1-201ENST00000477341 475 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RPS27P21-201ENST00000486977 252 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A1P02462 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 AC113420.1-201ENST00000507903 571 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SNORA31.22-201ENST00000517204 135 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 BTF3P12-201ENST00000519620 469 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SLC2A13P1-201ENST00000531560 322 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 MIR3921-201ENST00000577308 85 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 MIR3908-201ENST00000579798 126 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AP001429.1-201ENST00000602568 530 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 HSPE1P7-201ENST00000604681 321 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC069545.1-201ENST00000605671 358 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL050343.2-201ENST00000607338 280 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL357080.1-201ENST00000617394 239 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A1P02462 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 RNU1-148P-201ENST00000384472 162 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SNORA40.2-201ENST00000390847 128 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AL356421.1-201ENST00000403255 413 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SNORD23.1-201ENST00000408212 104 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 MTND1P21-201ENST00000412991 285 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 CYCSP33-201ENST00000414485 327 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A1P02462 SDCBPP1-201ENST00000440192 890 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 MTND5P14-201ENST00000441481 1267 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 ZNF886P-201ENST00000450781 723 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 ATG12P2-201ENST00000456830 416 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 MTND2P39-201ENST00000457230 764 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 RNU6-420P-201ENST00000458780 107 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A1P02462 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 HMGB1P28-201ENST00000507778 552 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL4A1P02462 MTND2P7-201ENST00000521337 640 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AP004247.1-201ENST00000531556 1289 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
COL4A1P02462 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A1P02462 AC068135.2-201ENST00000569293 1028 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A1P02462 AC069431.2-201ENST00000604149 1099 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC093838.1-201ENST00000613014 469 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 AC109809.1-201ENST00000619665 545 ntBASIC1.35□□□□□ -2.19
COL4A1P02462 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL4A1P02462 SNORA38-201ENST00000363946 132 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 MIR493-201ENST00000385254 89 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
COL4A1P02462 RNU2-40P-201ENST00000410833 196 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms