Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 HIGD1AP2-201ENST00000446367 280 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.87□□□□□ -1.95
COL2A1P02458 AL353705.4-201ENST00000449661 238 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 IFNWP4-201ENST00000453148 294 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL2A1P02458 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.87□□□□□ -1.95
COL2A1P02458 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RNU6-277P-201ENST00000516272 106 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RNU6-1045P-201ENST00000516321 107 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.87□□□□□ -1.95
COL2A1P02458 PSMA3P-201ENST00000555485 635 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.87□□□□□ -1.95
COL2A1P02458 AC010525.2-201ENST00000590920 195 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 VN1R80P-201ENST00000597126 338 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 RNU6-87P-201ENST00000607561 108 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL354950.2-201ENST00000617939 290 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 AL603758.1-201ENST00000618654 241 ntBASIC2.87□□□□□ -1.95
COL2A1P02458 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL2A1P02458 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL2A1P02458 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL2A1P02458 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
COL2A1P02458 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.86□□□□□ -1.95
COL2A1P02458 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL2A1P02458 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL2A1P02458 Y_RNA.231-201ENST00000364358 102 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 Y_RNA.338-201ENST00000365320 114 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 RNU6-574P-201ENST00000384265 107 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 MIR606-201ENST00000384851 96 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 MIR1-2-201ENST00000384961 85 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 RNU6-1158P-201ENST00000391167 107 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AC078974.1-201ENST00000411597 223 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.86□□□□□ -1.95
COL2A1P02458 BTF3L4P3-201ENST00000418879 476 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 MTCYBP6-201ENST00000441810 138 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 CBWD4P-201ENST00000445695 655 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AC022431.1-201ENST00000450941 438 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 MTND4P17-201ENST00000470444 350 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AC010301.1-201ENST00000473936 355 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL2A1P02458 FGF7P4-201ENST00000509595 295 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL2A1P02458 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.86□□□□□ -1.95
COL2A1P02458 AC005921.1-201ENST00000510589 286 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.86□□□□□ -1.95
COL2A1P02458 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.86□□□□□ -1.95
COL2A1P02458 MIR3118-1-201ENST00000581787 76 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.86□□□□□ -1.95
COL2A1P02458 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.86□□□□□ -1.95
COL2A1P02458 BBIP1P1-201ENST00000602999 279 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 AC009248.2-201ENST00000619826 254 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.86□□□□□ -1.95
COL2A1P02458 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL2A1P02458 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
COL2A1P02458 AL445437.1-201ENST00000623157 3087 ntBASIC2.86□□□□□ -1.95
COL2A1P02458 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL2A1P02458 MTND4P35-201ENST00000604257 1375 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL2A1P02458 MIR369-201ENST00000362155 70 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 SNORD114-30-201ENST00000364448 72 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
COL2A1P02458 RNU6-878P-201ENST00000384578 110 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 RNU6-1151P-201ENST00000384684 107 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 PRELID3BP11-201ENST00000414230 479 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 MTATP6P18-201ENST00000417994 673 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 DPH3P2-201ENST00000422618 250 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.85□□□□□ -1.95
COL2A1P02458 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.85□□□□□ -1.95
COL2A1P02458 AC002381.1-201ENST00000447049 280 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 Y_RNA.632-201ENST00000459189 102 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 RNU6-261P-201ENST00000459506 102 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC006512.1-201ENST00000468816 291 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC010587.1-201ENST00000505809 469 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 Vault.3-201ENST00000516676 95 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC022616.6-201ENST00000520479 119 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 CKS1BP7-201ENST00000522230 235 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.85□□□□□ -1.95
COL2A1P02458 HSPA8P13-201ENST00000523715 472 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.85□□□□□ -1.95
COL2A1P02458 AC068587.4-201ENST00000533893 186 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 SCOCP1-201ENST00000554676 349 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.85□□□□□ -1.95
COL2A1P02458 BX664608.1-201ENST00000610519 487 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AL353997.5-201ENST00000618886 171 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 AC090617.10-201ENST00000624308 134 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 TPTEP1-208ENST00000636884 213 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 U6.101-201ENST00000637707 76 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL2A1P02458 AL133412.1-201ENST00000380194 2992 ntBASIC2.85□□□□□ -1.95
COL2A1P02458 CKAP2P1-201ENST00000555477 2049 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms