Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL732372.2-207ENST00000445840 183 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.85□□□□□ -1.95
CLPTM1O96005 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
CLPTM1O96005 AC073415.1-201ENST00000449240 153 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 SEPT14P2-201ENST00000453405 183 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RNU6-261P-201ENST00000459506 102 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RPS20P20-201ENST00000460498 340 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RPL31P60-201ENST00000478450 367 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 SEM1P1-201ENST00000506694 209 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RBBP4P6-201ENST00000508098 202 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.85□□□□□ -1.95
CLPTM1O96005 SEPT14P4-201ENST00000513445 186 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RNU6-1178P-201ENST00000516674 107 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 RNA5SP503-201ENST00000517047 117 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLPTM1O96005 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.85□□□□□ -1.95
CLPTM1O96005 FO082796.1-201ENST00000523795 183 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.85□□□□□ -1.95
CLPTM1O96005 OR5BN1P-201ENST00000532955 829 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AC007179.3-201ENST00000604976 235 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AC008945.2-201ENST00000606056 604 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AP002826.1-201ENST00000608835 315 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AL020991.1-201ENST00000612314 373 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AL157817.1-201ENST00000614264 790 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AC010338.1-201ENST00000621823 717 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AC011155.2-201ENST00000623202 216 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 MIR3662-201ENST00000637030 95 ntBASIC2.85□□□□□ -1.95
CLPTM1O96005 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.85□□□□□ -1.95
CLPTM1O96005 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.85□□□□□ -1.95
CLPTM1O96005 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.85□□□□□ -1.95
CLPTM1O96005 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLPTM1O96005 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLPTM1O96005 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLPTM1O96005 MTND5P17-201ENST00000418405 1603 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLPTM1O96005 RPL9P7-201ENST00000330965 580 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 RNU6-451P-201ENST00000362921 107 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 SNORD115-7-201ENST00000365306 82 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 Y_RNA.573-201ENST00000384763 105 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 Y_RNA.576-201ENST00000384781 102 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 MIR493-201ENST00000385254 89 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 RNA5SP120-201ENST00000410900 112 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 OR9R1P-201ENST00000412200 877 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.84□□□□□ -1.95
CLPTM1O96005 AC005326.1-201ENST00000429197 123 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.84□□□□□ -1.95
CLPTM1O96005 MTCO2P3-201ENST00000442543 421 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 MTND4P18-201ENST00000447010 465 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 WASF1P1-201ENST00000447560 1131 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.84□□□□□ -1.95
CLPTM1O96005 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.84□□□□□ -1.95
CLPTM1O96005 BX510359.1-201ENST00000456973 237 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.84□□□□□ -1.95
CLPTM1O96005 GMFBP1-201ENST00000467831 427 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLPTM1O96005 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
CLPTM1O96005 AL359273.1-201ENST00000510918 627 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.84□□□□□ -1.95
CLPTM1O96005 AP001804.3-201ENST00000525146 880 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AP005435.4-201ENST00000529514 284 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC107016.2-201ENST00000547968 190 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.84□□□□□ -1.95
CLPTM1O96005 HIF1AP1-201ENST00000553642 175 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 RPL23AP84-201ENST00000571193 464 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 MIR4703-201ENST00000577728 79 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 RMST_3.1-201ENST00000611651 109 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC130324.3-201ENST00000614165 542 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC002553.4-201ENST00000616896 331 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 AC024940.5-201ENST00000622889 474 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 U6.114-201ENST00000636407 96 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 CKAP2P1-201ENST00000555477 2049 ntBASIC2.84□□□□□ -1.95
CLPTM1O96005 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.84□□□□□ -1.96
CLPTM1O96005 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.84□□□□□ -1.96
CLPTM1O96005 MTND5P1-201ENST00000445440 1375 ntBASIC2.84□□□□□ -1.96
CLPTM1O96005 AL354685.2-201ENST00000448218 1447 ntBASIC2.84□□□□□ -1.96
CLPTM1O96005 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.96
CLPTM1O96005 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CLPTM1O96005 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
CLPTM1O96005 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CLPTM1O96005 RNU6-552P-201ENST00000362869 119 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RNY3P3-201ENST00000363816 102 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 Y_RNA.255-201ENST00000364581 97 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 Y_RNA.333-201ENST00000365274 102 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RNU6-190P-201ENST00000384154 102 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLPTM1O96005 AL139397.2-201ENST00000404529 772 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AL513331.1-201ENST00000411908 397 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 BTF3L4P3-201ENST00000418879 476 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RPL30P16-201ENST00000419341 429 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AL645937.1-202ENST00000421799 937 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 AL118520.1-201ENST00000450770 291 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 snoU13.22-201ENST00000459428 104 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RPL31P58-201ENST00000469001 379 ntBASIC2.83□□□□□ -1.96
CLPTM1O96005 RPS29P25-201ENST00000481709 171 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms