Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC104073.3-201ENST00000610942 955 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AL359198.2-201ENST00000611836 194 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AP001486.3-201ENST00000615334 372 ntBASIC3.2□□□□□ -1.9
RTN3O95197 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AC024940.5-201ENST00000622889 474 ntBASIC3.2□□□□□ -1.9
RTN3O95197 MIR3199-2-201ENST00000636243 86 ntBASIC3.2□□□□□ -1.9
RTN3O95197 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN3O95197 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTN3O95197 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTN3O95197 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
RTN3O95197 SNORA62.1-201ENST00000364287 154 ntBASIC3.19□□□□□ -1.9
RTN3O95197 Y_RNA.296-201ENST00000364930 108 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
RTN3O95197 USP9YP6-201ENST00000413550 854 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AL358075.3-201ENST00000426289 226 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN3O95197 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.19□□□□□ -1.9
RTN3O95197 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RPS15AP27-201ENST00000449183 343 ntBASIC3.19□□□□□ -1.9
RTN3O95197 GSTA11P-201ENST00000452866 669 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RNU7-182P-201ENST00000459009 62 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC079382.1-201ENST00000493346 557 ntBASIC3.19□□□□□ -1.9
RTN3O95197 MTCO3P7-201ENST00000510008 774 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC098591.2-201ENST00000510152 315 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RNU6-572P-201ENST00000516724 80 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RNU6-1183P-201ENST00000517054 60 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AP003392.2-201ENST00000527269 208 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN3O95197 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN3O95197 MTCYBP33-201ENST00000575007 1130 ntBASIC3.19□□□□□ -1.9
RTN3O95197 MIR4782-201ENST00000577987 79 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN3O95197 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.19□□□□□ -1.9
RTN3O95197 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC126118.1-201ENST00000607744 628 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC107871.2-201ENST00000612894 502 ntBASIC3.19□□□□□ -1.9
RTN3O95197 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.19□□□□□ -1.9
RTN3O95197 SEPT14P19-203ENST00000633205 211 ntBASIC3.19□□□□□ -1.9
RTN3O95197 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN3O95197 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.19□□□□□ -1.9
RTN3O95197 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RTN3O95197 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
RTN3O95197 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN3O95197 SNORD115-7-201ENST00000365306 82 ntBASIC3.18□□□□□ -1.9
RTN3O95197 RNU4-48P-201ENST00000365559 182 ntBASIC3.18□□□□□ -1.9
RTN3O95197 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RTN3O95197 OR5H15-201ENST00000383696 930 ntBASIC3.18□□□□□ -1.9
RTN3O95197 RNU6-1103P-201ENST00000384150 107 ntBASIC3.18□□□□□ -1.9
RTN3O95197 Y_RNA.576-201ENST00000384781 102 ntBASIC3.18□□□□□ -1.9
RTN3O95197 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RTN3O95197 GSTA9P-201ENST00000406231 611 ntBASIC3.18□□□□□ -1.9
RTN3O95197 RNU2-16P-201ENST00000410712 136 ntBASIC3.18□□□□□ -1.9
RTN3O95197 RNA5SP111-201ENST00000411386 101 ntBASIC3.18□□□□□ -1.9
RTN3O95197 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN3O95197 AC096649.2-201ENST00000416186 393 ntBASIC3.18□□□□□ -1.9
RTN3O95197 MTATP6P18-201ENST00000417994 673 ntBASIC3.18□□□□□ -1.9
RTN3O95197 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTN3O95197 MTCYBP5-201ENST00000423752 1135 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AC073464.1-201ENST00000429823 534 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.18□□□□□ -1.9
RTN3O95197 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
RTN3O95197 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.18□□□□□ -1.9
RTN3O95197 HMGN2P10-201ENST00000448085 265 ntBASIC3.18□□□□□ -1.9
RTN3O95197 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
RTN3O95197 EIF4EP3-201ENST00000498782 656 ntBASIC3.18□□□□□ -1.9
RTN3O95197 HMGB1P29-201ENST00000505659 499 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AC104806.1-201ENST00000508720 308 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AC091133.4-201ENST00000511142 308 ntBASIC3.18□□□□□ -1.9
RTN3O95197 SNORA31.19-201ENST00000517079 126 ntBASIC3.18□□□□□ -1.9
RTN3O95197 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
RTN3O95197 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN3O95197 AC009063.1-201ENST00000563342 702 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AC020895.1-201ENST00000595362 272 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AL137843.1-201ENST00000605078 385 ntBASIC3.18□□□□□ -1.9
RTN3O95197 AL670379.4-201ENST00000605279 254 ntBASIC3.18□□□□□ -1.9
RTN3O95197 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.18□□□□□ -1.9
RTN3O95197 Z99129.1-201ENST00000612510 255 ntBASIC3.18□□□□□ -1.9
RTN3O95197 ATP5A1P2-202ENST00000616464 443 ntBASIC3.18□□□□□ -1.9
RTN3O95197 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
RTN3O95197 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTN3O95197 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 RNU6-1120P-201ENST00000362988 108 ntBASIC3.17□□□□□ -1.9
RTN3O95197 Y_RNA.436-201ENST00000384097 102 ntBASIC3.17□□□□□ -1.9
RTN3O95197 SNORA44-201ENST00000384584 132 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RNU6-606P-201ENST00000384721 111 ntBASIC3.17□□□□□ -1.9
RTN3O95197 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
RTN3O95197 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
RTN3O95197 SNORA40C-201ENST00000391285 128 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AL592114.1-201ENST00000403842 483 ntBASIC3.17□□□□□ -1.9
RTN3O95197 RNU2-66P-201ENST00000410650 161 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.17□□□□□ -1.9
RTN3O95197 AC007560.1-201ENST00000426912 237 ntBASIC3.17□□□□□ -1.9
RTN3O95197 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
RTN3O95197 MYL8P-204ENST00000431574 518 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms