Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.6□□□□□ -1.67
SMARCA5O60264 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMARCA5O60264 AP000889.2-201ENST00000532684 490 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 MIR4703-201ENST00000577728 79 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 AC087588.2-201ENST00000617667 426 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.6□□□□□ -1.67
SMARCA5O60264 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.6□□□□□ -1.67
SMARCA5O60264 AC119674.1-207ENST00000641355 633 ntBASIC4.6□□□□□ -1.67
SMARCA5O60264 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMARCA5O60264 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.6□□□□□ -1.67
SMARCA5O60264 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
SMARCA5O60264 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMARCA5O60264 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.59□□□□□ -1.67
SMARCA5O60264 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMARCA5O60264 RNU1-18P-201ENST00000363062 164 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SMARCA5O60264 SNORA57.1-201ENST00000391227 145 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 MTHFD2P2-201ENST00000407725 247 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AC114491.1-201ENST00000416095 246 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.59□□□□□ -1.67
SMARCA5O60264 SNRPEP9-201ENST00000436794 238 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.59□□□□□ -1.67
SMARCA5O60264 AC107399.1-201ENST00000451226 265 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 RPL7P5-201ENST00000471472 736 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 RPL23AP11-201ENST00000475260 469 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AC002456.2-201ENST00000509356 380 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 Y_RNA.689-201ENST00000516589 107 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 MIR2114-201ENST00000516645 80 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 RNU6-711P-201ENST00000517255 106 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.59□□□□□ -1.67
SMARCA5O60264 RANP3-201ENST00000530970 276 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AL117187.1-201ENST00000555482 181 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.59□□□□□ -1.67
SMARCA5O60264 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.59□□□□□ -1.67
SMARCA5O60264 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.59□□□□□ -1.67
SMARCA5O60264 AL355598.1-201ENST00000604169 202 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AC005344.1-201ENST00000613391 459 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMARCA5O60264 AC011155.2-201ENST00000623202 216 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 AC073308.1-201ENST00000623696 305 ntBASIC4.59□□□□□ -1.67
SMARCA5O60264 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SMARCA5O60264 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SMARCA5O60264 RNU6-1188P-201ENST00000363795 107 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 RNU6-512P-201ENST00000364438 103 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 RNA5SP424-201ENST00000390988 115 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 RNU2-68P-201ENST00000410878 191 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.58□□□□□ -1.68
SMARCA5O60264 AL451062.2-201ENST00000427515 271 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.58□□□□□ -1.68
SMARCA5O60264 AL445584.1-201ENST00000431451 330 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 AC005019.1-201ENST00000436455 431 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 RN7SL93P-201ENST00000463035 293 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 RN7SKP24-201ENST00000515888 284 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 RNU6-566P-201ENST00000516790 107 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.58□□□□□ -1.68
SMARCA5O60264 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 MIR3149-201ENST00000584629 83 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.58□□□□□ -1.68
SMARCA5O60264 uc_338.34-201ENST00000617467 174 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 AC103858.2-201ENST00000621471 543 ntBASIC4.58□□□□□ -1.68
SMARCA5O60264 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
SMARCA5O60264 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMARCA5O60264 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.58□□□□□ -1.68
SMARCA5O60264 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SMARCA5O60264 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMARCA5O60264 AC010680.1-201ENST00000590024 3590 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SMARCA5O60264 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
SMARCA5O60264 Y_RNA.193-201ENST00000363979 102 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 RNU6-1318P-201ENST00000365389 103 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 RNU6-1013P-201ENST00000384180 107 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 MIR888-201ENST00000401186 77 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 MIR548F4-201ENST00000408515 105 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 RNU2-29P-201ENST00000410423 189 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 RPL37P10-201ENST00000412884 288 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AC074085.1-201ENST00000413598 418 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.57□□□□□ -1.68
SMARCA5O60264 NUP35P1-201ENST00000422734 947 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 MTCYBP9-201ENST00000431021 303 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AL160004.2-201ENST00000432935 350 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.57□□□□□ -1.68
SMARCA5O60264 RPL21P133-201ENST00000443666 476 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.57□□□□□ -1.68
SMARCA5O60264 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMARCA5O60264 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.57□□□□□ -1.68
SMARCA5O60264 AL133162.1-201ENST00000463228 453 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 MTATP8P1-201ENST00000467115 207 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 TRBV1-201ENST00000476502 284 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 RNA5SP503-201ENST00000517047 117 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AP003122.3-201ENST00000526316 255 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SMARCA5O60264 AC110588.1-201ENST00000559699 137 ntBASIC4.57□□□□□ -1.68
SMARCA5O60264 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.57□□□□□ -1.68
SMARCA5O60264 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.57□□□□□ -1.68
SMARCA5O60264 7SK.7-201ENST00000603504 247 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms