Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPL23AP14-201ENST00000468281 468 ntBASIC3.2□□□□□ -1.9
LDB2O43679 CCDC34P1-201ENST00000507441 517 ntBASIC3.2□□□□□ -1.9
LDB2O43679 MTND3P22-201ENST00000510932 243 ntBASIC3.2□□□□□ -1.9
LDB2O43679 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.2□□□□□ -1.9
LDB2O43679 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB2O43679 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB2O43679 RAB11AP2-201ENST00000545905 639 ntBASIC3.2□□□□□ -1.9
LDB2O43679 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 PSMA3P-201ENST00000555485 635 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
LDB2O43679 AC002545.1-201ENST00000592511 181 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 AL117336.2-201ENST00000602435 335 ntBASIC3.2□□□□□ -1.9
LDB2O43679 C8orf59P2-201ENST00000603441 271 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC013553.2-201ENST00000604244 589 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC093913.1-201ENST00000614178 329 ntBASIC3.2□□□□□ -1.9
LDB2O43679 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
LDB2O43679 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 AC009248.2-201ENST00000619826 254 ntBASIC3.2□□□□□ -1.9
LDB2O43679 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 AC073544.1-201ENST00000600110 1595 ntBASIC3.2□□□□□ -1.9
LDB2O43679 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB2O43679 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB2O43679 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
LDB2O43679 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB2O43679 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
LDB2O43679 Y_RNA.142-201ENST00000363491 102 ntBASIC3.19□□□□□ -1.9
LDB2O43679 U3.12-201ENST00000364498 214 ntBASIC3.19□□□□□ -1.9
LDB2O43679 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LDB2O43679 SNORA32.2-201ENST00000384049 122 ntBASIC3.19□□□□□ -1.9
LDB2O43679 CISD1P1-201ENST00000393907 327 ntBASIC3.19□□□□□ -1.9
LDB2O43679 RNU6-1148P-201ENST00000410992 104 ntBASIC3.19□□□□□ -1.9
LDB2O43679 RNA5SP111-201ENST00000411386 101 ntBASIC3.19□□□□□ -1.9
LDB2O43679 RPS12P24-201ENST00000412619 387 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 PDCL2P1-201ENST00000419302 352 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AL356867.1-201ENST00000429623 299 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB2O43679 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC006028.1-201ENST00000438379 402 ntBASIC3.19□□□□□ -1.9
LDB2O43679 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB2O43679 RNU6-1208P-201ENST00000459588 107 ntBASIC3.19□□□□□ -1.9
LDB2O43679 Y_RNA.654-201ENST00000497848 106 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC110794.1-201ENST00000505816 425 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB2O43679 MTCO3P9-201ENST00000506989 781 ntBASIC3.19□□□□□ -1.9
LDB2O43679 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
LDB2O43679 BTF3P12-201ENST00000519620 469 ntBASIC3.19□□□□□ -1.9
LDB2O43679 RPL7P20-201ENST00000520308 745 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
LDB2O43679 AC107953.1-201ENST00000522216 297 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC087241.2-201ENST00000535801 324 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AL118558.2-201ENST00000556294 238 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB2O43679 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB2O43679 AC022893.3-201ENST00000607665 437 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC092807.2-201ENST00000609367 243 ntBASIC3.19□□□□□ -1.9
LDB2O43679 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
LDB2O43679 MIR7112-201ENST00000616126 65 ntBASIC3.19□□□□□ -1.9
LDB2O43679 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
LDB2O43679 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB2O43679 AL672296.1-201ENST00000427780 2158 ntBASIC3.19□□□□□ -1.9
LDB2O43679 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDB2O43679 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDB2O43679 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LDB2O43679 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDB2O43679 AL365361.1-201ENST00000566942 3481 ntBASIC3.18□□□□□ -1.9
LDB2O43679 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDB2O43679 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDB2O43679 MTND4P35-201ENST00000604257 1375 ntBASIC3.18□□□□□ -1.9
LDB2O43679 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDB2O43679 RNU6-82P-201ENST00000363970 107 ntBASIC3.18□□□□□ -1.9
LDB2O43679 SNORD81.2-201ENST00000365153 76 ntBASIC3.18□□□□□ -1.9
LDB2O43679 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
LDB2O43679 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDB2O43679 RNU6-1127P-201ENST00000384580 107 ntBASIC3.18□□□□□ -1.9
LDB2O43679 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
LDB2O43679 AL139397.2-201ENST00000404529 772 ntBASIC3.18□□□□□ -1.9
LDB2O43679 RN7SKP32-201ENST00000410167 303 ntBASIC3.18□□□□□ -1.9
LDB2O43679 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB2O43679 AC091390.3-201ENST00000426478 338 ntBASIC3.18□□□□□ -1.9
LDB2O43679 IFNA20P-201ENST00000436840 528 ntBASIC3.18□□□□□ -1.9
LDB2O43679 SCARNA18-201ENST00000459004 134 ntBASIC3.18□□□□□ -1.9
LDB2O43679 RPS20P22-201ENST00000473700 357 ntBASIC3.18□□□□□ -1.9
LDB2O43679 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB2O43679 FAM206BP-201ENST00000510179 541 ntBASIC3.18□□□□□ -1.9
LDB2O43679 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
LDB2O43679 AC022690.1-201ENST00000526681 550 ntBASIC3.18□□□□□ -1.9
LDB2O43679 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
LDB2O43679 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.18□□□□□ -1.9
LDB2O43679 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB2O43679 VN1R80P-201ENST00000597126 338 ntBASIC3.18□□□□□ -1.9
LDB2O43679 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms