Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.54□□□□□ -2
PHF1O43189 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.54□□□□□ -2
PHF1O43189 RPS29P12-201ENST00000460178 152 ntBASIC2.54□□□□□ -2
PHF1O43189 AC126389.1-201ENST00000477436 290 ntBASIC2.54□□□□□ -2
PHF1O43189 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
PHF1O43189 AC079382.1-201ENST00000493346 557 ntBASIC2.54□□□□□ -2
PHF1O43189 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
PHF1O43189 AC114781.4-201ENST00000513707 639 ntBASIC2.54□□□□□ -2
PHF1O43189 SNORA40.12-201ENST00000516329 111 ntBASIC2.54□□□□□ -2
PHF1O43189 SNORA70.16-201ENST00000516390 95 ntBASIC2.54□□□□□ -2
PHF1O43189 SCARNA15.2-201ENST00000516409 127 ntBASIC2.54□□□□□ -2
PHF1O43189 RNU6-314P-201ENST00000516574 104 ntBASIC2.54□□□□□ -2
PHF1O43189 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
PHF1O43189 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
PHF1O43189 AP001804.3-201ENST00000525146 880 ntBASIC2.54□□□□□ -2
PHF1O43189 AP006587.4-201ENST00000526053 529 ntBASIC2.54□□□□□ -2
PHF1O43189 OR5AQ1P-201ENST00000527596 927 ntBASIC2.54□□□□□ -2
PHF1O43189 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.54□□□□□ -2
PHF1O43189 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
PHF1O43189 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.54□□□□□ -2
PHF1O43189 MIR4524B-201ENST00000581569 115 ntBASIC2.54□□□□□ -2
PHF1O43189 MIR4769-201ENST00000584126 77 ntBASIC2.54□□□□□ -2
PHF1O43189 NUTF2P8-201ENST00000604593 363 ntBASIC2.54□□□□□ -2
PHF1O43189 AC106900.2-201ENST00000604994 317 ntBASIC2.54□□□□□ -2
PHF1O43189 AP001596.2-201ENST00000608410 312 ntBASIC2.54□□□□□ -2
PHF1O43189 AC090132.2-201ENST00000615881 347 ntBASIC2.54□□□□□ -2
PHF1O43189 AC093648.1-201ENST00000623546 606 ntBASIC2.54□□□□□ -2
PHF1O43189 FRG1KP-201ENST00000623592 341 ntBASIC2.54□□□□□ -2
PHF1O43189 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PHF1O43189 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.54□□□□□ -2
PHF1O43189 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.54□□□□□ -2
PHF1O43189 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
PHF1O43189 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PHF1O43189 FAM35BP-202ENST00000497389 3337 ntBASIC2.53□□□□□ -2
PHF1O43189 MTND5P17-201ENST00000418405 1603 ntBASIC2.53□□□□□ -2
PHF1O43189 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PHF1O43189 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PHF1O43189 ELF2P3-201ENST00000445099 1506 ntBASIC2.53□□□□□ -2
PHF1O43189 ZNF680P1-201ENST00000436625 1469 ntBASIC2.53□□□□□ -2
PHF1O43189 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
PHF1O43189 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.53□□□□□ -2
PHF1O43189 AC062016.1-201ENST00000355719 319 ntBASIC2.53□□□□□ -2
PHF1O43189 Y_RNA.372-201ENST00000365599 102 ntBASIC2.53□□□□□ -2
PHF1O43189 U8.9-201ENST00000365667 134 ntBASIC2.53□□□□□ -2
PHF1O43189 Y_RNA.450-201ENST00000384198 113 ntBASIC2.53□□□□□ -2
PHF1O43189 MIR454-201ENST00000390180 115 ntBASIC2.53□□□□□ -2
PHF1O43189 RNA5SP252-201ENST00000391131 119 ntBASIC2.53□□□□□ -2
PHF1O43189 RNU6-1158P-201ENST00000391167 107 ntBASIC2.53□□□□□ -2
PHF1O43189 RN7SKP220-201ENST00000410611 288 ntBASIC2.53□□□□□ -2
PHF1O43189 AC018630.2-202ENST00000422992 927 ntBASIC2.53□□□□□ -2
PHF1O43189 RAC1P6-201ENST00000423911 575 ntBASIC2.53□□□□□ -2
PHF1O43189 RPL27AP8-201ENST00000424277 446 ntBASIC2.53□□□□□ -2
PHF1O43189 AC008850.1-201ENST00000427546 362 ntBASIC2.53□□□□□ -2
PHF1O43189 AL139132.1-201ENST00000431587 344 ntBASIC2.53□□□□□ -2
PHF1O43189 RBMX2P4-201ENST00000441256 376 ntBASIC2.53□□□□□ -2
PHF1O43189 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 DDX3P2-201ENST00000446138 111 ntBASIC2.53□□□□□ -2
PHF1O43189 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
PHF1O43189 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.53□□□□□ -2
PHF1O43189 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.53□□□□□ -2
PHF1O43189 AL031183.1-201ENST00000457667 207 ntBASIC2.53□□□□□ -2
PHF1O43189 RPL21P41-201ENST00000459863 264 ntBASIC2.53□□□□□ -2
PHF1O43189 AL121769.1-201ENST00000469473 401 ntBASIC2.53□□□□□ -2
PHF1O43189 AC083798.1-201ENST00000472671 131 ntBASIC2.53□□□□□ -2
PHF1O43189 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.53□□□□□ -2
PHF1O43189 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 AP001646.1-201ENST00000527936 915 ntBASIC2.53□□□□□ -2
PHF1O43189 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.53□□□□□ -2
PHF1O43189 AC078899.3-201ENST00000599065 212 ntBASIC2.53□□□□□ -2
PHF1O43189 AC012119.1-201ENST00000603184 222 ntBASIC2.53□□□□□ -2
PHF1O43189 AL035413.2-201ENST00000604801 525 ntBASIC2.53□□□□□ -2
PHF1O43189 AC139792.3-201ENST00000623525 224 ntBASIC2.53□□□□□ -2
PHF1O43189 MIR1321-201ENST00000637766 79 ntBASIC2.53□□□□□ -2
PHF1O43189 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.53□□□□□ -2
PHF1O43189 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2
PHF1O43189 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PHF1O43189 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
PHF1O43189 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.53□□□□□ -2.01
PHF1O43189 AC103710.2-202ENST00000641454 2853 ntBASIC2.52□□□□□ -2.01
PHF1O43189 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.52□□□□□ -2.01
PHF1O43189 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHF1O43189 AL139276.1-201ENST00000311910 1001 ntBASIC2.52□□□□□ -2.01
PHF1O43189 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PHF1O43189 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PHF1O43189 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PHF1O43189 Y_RNA.9-201ENST00000362354 101 ntBASIC2.52□□□□□ -2.01
PHF1O43189 RNU5A-1-201ENST00000362698 116 ntBASIC2.52□□□□□ -2.01
PHF1O43189 RNU6-1085P-201ENST00000363576 107 ntBASIC2.52□□□□□ -2.01
PHF1O43189 RNU6-1283P-201ENST00000365314 105 ntBASIC2.52□□□□□ -2.01
PHF1O43189 RNU4-48P-201ENST00000365559 182 ntBASIC2.52□□□□□ -2.01
PHF1O43189 Y_RNA.481-201ENST00000384373 102 ntBASIC2.52□□□□□ -2.01
PHF1O43189 SNORA26.7-201ENST00000391288 122 ntBASIC2.52□□□□□ -2.01
PHF1O43189 AL139397.2-201ENST00000404529 772 ntBASIC2.52□□□□□ -2.01
PHF1O43189 NDUFS5P1-201ENST00000405668 289 ntBASIC2.52□□□□□ -2.01
PHF1O43189 MIR1290-201ENST00000408735 78 ntBASIC2.52□□□□□ -2.01
PHF1O43189 RNU2-39P-201ENST00000410604 198 ntBASIC2.52□□□□□ -2.01
PHF1O43189 Z85995.1-201ENST00000415547 335 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms