Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MRPL50P4-201ENST00000446432 475 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 MTND1P11-201ENST00000456661 876 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.55□□□□□ -1.84
PHGDHO43175 RPS29P20-201ENST00000489592 171 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AC103851.1-201ENST00000506833 274 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC108043.1-201ENST00000512696 574 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AC026402.1-201ENST00000513642 170 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 RNU6-1183P-201ENST00000517054 60 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.55□□□□□ -1.84
PHGDHO43175 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHGDHO43175 AP000889.2-201ENST00000532684 490 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.55□□□□□ -1.84
PHGDHO43175 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.55□□□□□ -1.84
PHGDHO43175 FGF7P1-201ENST00000582820 288 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC243960.4-201ENST00000600532 288 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AL020997.2-201ENST00000602607 184 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 C8orf59P2-201ENST00000603441 271 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AC012468.1-201ENST00000604888 430 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AL022345.1-201ENST00000607292 135 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 AC119674.1-207ENST00000641355 633 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.55□□□□□ -1.84
PHGDHO43175 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHGDHO43175 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHGDHO43175 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.54□□□□□ -1.84
PHGDHO43175 MTND5P7-201ENST00000413558 1798 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PHGDHO43175 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 MIR34A-201ENST00000385130 110 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AL356432.1-201ENST00000405809 419 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 U3.39-201ENST00000408569 239 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 RNU2-41P-201ENST00000410991 178 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.54□□□□□ -1.84
PHGDHO43175 VN1R36P-201ENST00000414936 291 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.54□□□□□ -1.84
PHGDHO43175 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.54□□□□□ -1.84
PHGDHO43175 HMGB1P9-201ENST00000429856 646 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 HMGN2P20-201ENST00000437531 273 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AC128713.1-201ENST00000471495 306 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 RPL7P43-201ENST00000478876 753 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 RNU6-579P-201ENST00000516879 102 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AC087854.1-201ENST00000519706 414 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
PHGDHO43175 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.54□□□□□ -1.84
PHGDHO43175 AL391261.3-201ENST00000557194 520 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AL117336.2-201ENST00000602435 335 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.54□□□□□ -1.84
PHGDHO43175 AC022149.2-201ENST00000621061 203 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 TPTEP1-208ENST00000636884 213 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.54□□□□□ -1.84
PHGDHO43175 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 SRP72P2-201ENST00000344851 1979 ntBASIC3.54□□□□□ -1.84
PHGDHO43175 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PHGDHO43175 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
PHGDHO43175 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PHGDHO43175 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PHGDHO43175 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PHGDHO43175 AC138393.1-203ENST00000327086 343 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 Y_RNA.263-201ENST00000364659 114 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RNU6-198P-201ENST00000384258 104 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PHGDHO43175 AL122016.1-201ENST00000403365 367 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RPS15AP6-201ENST00000420703 385 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.53□□□□□ -1.84
PHGDHO43175 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.53□□□□□ -1.84
PHGDHO43175 RNU7-138P-201ENST00000459479 64 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 SNORA31.1-201ENST00000515993 133 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 SNORA31.5-201ENST00000516190 133 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RNU6-1332P-201ENST00000516666 104 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.53□□□□□ -1.84
PHGDHO43175 AC025423.5-201ENST00000550230 219 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 CYCSP39-201ENST00000565821 309 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 APOOP1-201ENST00000604695 592 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RNU6-85P-201ENST00000605989 107 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PHGDHO43175 FAM157A-202ENST00000615155 405 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 RMST_7.1-201ENST00000621935 268 ntBASIC3.53□□□□□ -1.84
PHGDHO43175 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms