Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.52□□□□□ -2.17
UBFD1O14562 UBE2L4-201ENST00000587688 464 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 DPPA3P3-201ENST00000603842 430 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC239868.4-201ENST00000608318 671 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC084824.5-201ENST00000612009 413 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC009268.2-201ENST00000621925 457 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AP003485.1-201ENST00000625093 753 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC126544.2-201ENST00000625174 749 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 Y_RNA.118-201ENST00000363300 101 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 RNU6-744P-201ENST00000365557 107 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 RNU6-1316P-201ENST00000384242 108 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 CCNG1P1-201ENST00000406783 885 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.51□□□□□ -2.17
UBFD1O14562 TIMM9P2-201ENST00000419324 266 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AL445669.1-201ENST00000426743 755 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.51□□□□□ -2.17
UBFD1O14562 EEF1E1P1-201ENST00000446998 430 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.51□□□□□ -2.17
UBFD1O14562 MTCO1P42-201ENST00000457379 726 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AC055731.1-201ENST00000474387 401 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.51□□□□□ -2.17
UBFD1O14562 SUMO2P5-201ENST00000506790 245 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.51□□□□□ -2.17
UBFD1O14562 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 RNA5SP165-201ENST00000517142 115 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AP005435.4-201ENST00000529514 284 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.51□□□□□ -2.17
UBFD1O14562 AC021739.1-201ENST00000559631 174 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AL512347.1-201ENST00000566420 503 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 VN1R83P-201ENST00000595685 445 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AC024060.1-201ENST00000607052 494 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.51□□□□□ -2.17
UBFD1O14562 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AC005296.1-201ENST00000616145 209 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 AC006026.1-201ENST00000444025 1803 ntBASIC1.51□□□□□ -2.17
UBFD1O14562 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.51□□□□□ -2.17
UBFD1O14562 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.5□□□□□ -2.17
UBFD1O14562 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBFD1O14562 Y_RNA.245-201ENST00000364493 95 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 U8.10-201ENST00000384260 133 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 RNU1-148P-201ENST00000384472 162 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 RNU6-321P-201ENST00000410912 106 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 NDUFS5P4-201ENST00000412983 318 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 XKRYP1-201ENST00000423438 492 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 XKRYP2-201ENST00000432915 492 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC004383.1-201ENST00000438135 289 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC010631.1-201ENST00000474150 156 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC108078.2-201ENST00000510750 236 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 RNU6-390P-201ENST00000516259 103 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 AP003168.1-201ENST00000530091 307 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.5□□□□□ -2.17
UBFD1O14562 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 RPL21P136-201ENST00000605378 396 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AL359821.1-201ENST00000605519 182 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AC006270.3-201ENST00000605967 1036 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.5□□□□□ -2.17
UBFD1O14562 AC018926.1-201ENST00000616335 435 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AC025048.6-202ENST00000627667 438 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.5□□□□□ -2.17
UBFD1O14562 MIR3199-2-201ENST00000636243 86 ntBASIC1.5□□□□□ -2.17
UBFD1O14562 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBFD1O14562 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
UBFD1O14562 RNU6-432P-201ENST00000384196 109 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 MTND1P21-201ENST00000412991 285 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC019070.1-201ENST00000415008 1024 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC093106.2-201ENST00000428212 385 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.49□□□□□ -2.17
UBFD1O14562 MTCO3P45-201ENST00000443036 613 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AC124916.1-201ENST00000444020 547 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.49□□□□□ -2.17
UBFD1O14562 SNRPGP9-201ENST00000456025 225 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AC139453.3-201ENST00000493276 369 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.49□□□□□ -2.17
UBFD1O14562 AC007229.1-201ENST00000590455 412 ntBASIC1.49□□□□□ -2.17
UBFD1O14562 AC068620.3-201ENST00000602749 560 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms