Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM38O00635 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.65□□□□□ -1.82
TRIM38O00635 Y_RNA.231-201ENST00000364358 102 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 MIR1-2-201ENST00000384961 85 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM38O00635 AC080125.1-201ENST00000414888 684 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM38O00635 AC093106.2-201ENST00000428212 385 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC092573.2-201ENST00000434546 243 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 HMGN2P20-201ENST00000437531 273 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 PIGFP3-201ENST00000441918 722 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM38O00635 MTND5P22-201ENST00000458380 195 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 RNU6-1208P-201ENST00000459588 107 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 MRPS17P3-201ENST00000465453 385 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM38O00635 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC108078.2-201ENST00000510750 236 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC005741.1-201ENST00000511094 432 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 APOOP4-201ENST00000513530 597 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 RNU4-49P-201ENST00000516080 140 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 RNU6-264P-201ENST00000517134 104 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 RNU6-794P-201ENST00000517261 64 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 COX6CP5-201ENST00000527162 228 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM38O00635 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM38O00635 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM38O00635 AC005668.1-201ENST00000571142 476 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC098826.3-201ENST00000603823 466 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC008962.1-201ENST00000605729 304 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AL627309.6-201ENST00000606857 840 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AL138880.2-201ENST00000616214 239 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 AC068831.7-201ENST00000616954 363 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 uc_338.11-201ENST00000619132 160 ntBASIC3.65□□□□□ -1.83
TRIM38O00635 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM38O00635 AL021368.2-201ENST00000606125 5352 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM38O00635 AC093908.1-201ENST00000623125 8092 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM38O00635 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 SNORA24.1-201ENST00000384401 135 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RNU6-505P-201ENST00000384427 107 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 SNORD116-29-201ENST00000384516 83 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 MIR490-201ENST00000384865 128 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RNU6-510P-201ENST00000391239 108 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL139397.2-201ENST00000404529 772 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM38O00635 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 AL645937.1-202ENST00000421799 937 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AC007919.1-201ENST00000429380 217 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM38O00635 CACYBPP2-201ENST00000453625 678 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL356010.1-201ENST00000456364 102 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RNU6-329P-201ENST00000459618 107 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RPL23AP62-201ENST00000463396 453 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 KC877373.1-201ENST00000479066 408 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL135752.1-201ENST00000479477 471 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RPL30P14-201ENST00000482744 348 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 RNU6-1314P-201ENST00000517139 104 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM38O00635 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM38O00635 AMZ2P1-203ENST00000565833 850 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM38O00635 AC010591.1-201ENST00000603941 649 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL161798.1-201ENST00000604630 131 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 Z84480.1-201ENST00000605131 311 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL080274.1-201ENST00000605565 220 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM38O00635 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL359547.2-201ENST00000615810 418 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AC025034.2-201ENST00000623264 286 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 AL133216.2-202ENST00000634512 349 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM38O00635 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM38O00635 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM38O00635 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM38O00635 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
TRIM38O00635 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM38O00635 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM38O00635 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM38O00635 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM38O00635 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM38O00635 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
TRIM38O00635 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM38O00635 UBE2L2-201ENST00000254302 429 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 Y_RNA.31-201ENST00000362574 102 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 Y_RNA.245-201ENST00000364493 95 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 RNU6-61P-201ENST00000365528 109 ntBASIC3.63□□□□□ -1.83
TRIM38O00635 SNORA22B-201ENST00000383876 138 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms