Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 HMGB3P17-201ENST00000504195 649 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RPF2P2-201ENST00000504693 896 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UPK1AO00322 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RNU6-143P-201ENST00000516942 93 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 RNU6-703P-201ENST00000516946 107 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.71□□□□□ -2.14
UPK1AO00322 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.71□□□□□ -2.14
UPK1AO00322 AP000889.1-201ENST00000530968 660 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
UPK1AO00322 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.71□□□□□ -2.14
UPK1AO00322 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 ROCK1P1-201ENST00000573767 549 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC090079.2-201ENST00000575289 768 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1AO00322 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC022662.1-201ENST00000580252 331 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 BNIP3P23-201ENST00000599655 511 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AL158050.2-201ENST00000605336 568 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC072039.2-201ENST00000608883 439 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC103710.2-201ENST00000609912 942 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 AC009318.2-201ENST00000610917 651 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1AO00322 AP000776.1-201ENST00000530032 1663 ntBASIC1.71□□□□□ -2.14
UPK1AO00322 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UPK1AO00322 RNU6-1284P-201ENST00000363701 100 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 RNU6-723P-201ENST00000383973 107 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 CIR1P3-201ENST00000405137 479 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 RNU2-63P-201ENST00000410792 194 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1AO00322 MTND3P1-201ENST00000441336 220 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.7□□□□□ -2.14
UPK1AO00322 AL031313.1-201ENST00000448435 256 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 RPL23AP35-201ENST00000451906 501 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC108059.3-201ENST00000456388 214 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC055855.1-201ENST00000489563 579 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC139453.3-201ENST00000493276 369 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC112206.4-201ENST00000515142 405 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 DEFB108A-201ENST00000530110 222 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1AO00322 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
UPK1AO00322 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 NRBF2P1-201ENST00000587407 859 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1AO00322 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1AO00322 AL162373.1-201ENST00000620433 407 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AL356596.1-201ENST00000624230 379 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AP002371.2-201ENST00000624450 503 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AP000720.1-201ENST00000625091 483 ntBASIC1.7□□□□□ -2.14
UPK1AO00322 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK1AO00322 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK1AO00322 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 VPS26BP1-201ENST00000417155 755 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 ZNF90P2-204ENST00000419323 1075 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.69□□□□□ -2.14
UPK1AO00322 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK1AO00322 TXNL1P1-201ENST00000429528 554 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 MTND4P25-201ENST00000441039 533 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 USP9YP15-201ENST00000442391 422 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 PTENP1-201ENST00000447117 1215 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 EXOSC3P1-201ENST00000448649 500 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.69□□□□□ -2.14
UPK1AO00322 AC092001.1-201ENST00000453012 261 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 AC068587.2-201ENST00000478386 781 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC068781.1-201ENST00000488231 618 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.69□□□□□ -2.14
UPK1AO00322 MRPS33P3-201ENST00000513456 322 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 RNU6-581P-201ENST00000516214 105 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.69□□□□□ -2.14
UPK1AO00322 CBX3P7-201ENST00000532876 502 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC007375.1-201ENST00000554513 578 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.69□□□□□ -2.14
UPK1AO00322 MIR4782-201ENST00000577987 79 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AL391001.1-201ENST00000602747 715 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UPK1AO00322 AL592221.1-201ENST00000605266 382 ntBASIC1.69□□□□□ -2.14
UPK1AO00322 AC097468.3-201ENST00000607956 456 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms