Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RFXAPO00287 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFXAPO00287 RNU6-545P-201ENST00000362681 104 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 Y_RNA.54-201ENST00000362766 105 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 RNY1P16-201ENST00000363063 111 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 SNORD113-1-201ENST00000365321 69 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFXAPO00287 MIR921-201ENST00000401133 56 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 MIR548H3-201ENST00000408771 118 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.22□□□□□ -1.73
RFXAPO00287 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.22□□□□□ -1.73
RFXAPO00287 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.22□□□□□ -1.73
RFXAPO00287 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
RFXAPO00287 Y_RNA.687-201ENST00000516558 91 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 AP006587.4-201ENST00000526053 529 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.22□□□□□ -1.73
RFXAPO00287 YPEL5P3-201ENST00000547227 352 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.22□□□□□ -1.73
RFXAPO00287 VN1R91P-201ENST00000594377 169 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 HSPA8P1-201ENST00000425843 1833 ntBASIC4.22□□□□□ -1.73
RFXAPO00287 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
RFXAPO00287 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFXAPO00287 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFXAPO00287 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
RFXAPO00287 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.73
RFXAPO00287 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.21□□□□□ -1.74
RFXAPO00287 RNY1-201ENST00000364228 113 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNU4-50P-201ENST00000364361 141 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 Y_RNA.277-201ENST00000364754 102 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNA5SP267-201ENST00000364893 126 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNA5SP97-201ENST00000365006 84 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNU6-637P-201ENST00000384050 107 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNU6-45P-201ENST00000384471 107 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNU2-71P-201ENST00000411395 189 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 UBE2V1P4-201ENST00000425374 344 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL591419.1-201ENST00000427423 339 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AC004383.1-201ENST00000438135 289 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 EIF4A1P11-201ENST00000451239 222 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 RNU7-138P-201ENST00000459479 64 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL133162.1-201ENST00000463228 453 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.21□□□□□ -1.74
RFXAPO00287 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.21□□□□□ -1.74
RFXAPO00287 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.21□□□□□ -1.74
RFXAPO00287 AL390123.1-201ENST00000603216 237 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL670379.6-201ENST00000603753 252 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL670379.1-201ENST00000604752 252 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL670379.5-201ENST00000605253 252 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL670379.8-201ENST00000605353 252 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AL670379.7-201ENST00000605823 252 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AC006023.2-201ENST00000609916 167 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 SNHG22-203ENST00000617833 660 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 AC110801.1-201ENST00000623590 212 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.21□□□□□ -1.74
RFXAPO00287 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.21□□□□□ -1.74
RFXAPO00287 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFXAPO00287 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RFXAPO00287 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
RFXAPO00287 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFXAPO00287 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
RFXAPO00287 DDX18P3-201ENST00000404856 2007 ntBASIC4.21□□□□□ -1.74
RFXAPO00287 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFXAPO00287 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RFXAPO00287 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFXAPO00287 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.2□□□□□ -1.74
RFXAPO00287 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFXAPO00287 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.2□□□□□ -1.74
RFXAPO00287 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RFXAPO00287 Y_RNA.16-201ENST00000362421 102 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 snoU2_19.2-201ENST00000363024 80 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 RNA5SP399-201ENST00000364003 117 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 U1.1-201ENST00000384101 164 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AL139156.1-201ENST00000412785 841 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.2□□□□□ -1.74
RFXAPO00287 HMGN2P13-201ENST00000476476 274 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AC074198.2-201ENST00000508153 258 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.2□□□□□ -1.74
RFXAPO00287 RNU7-143P-201ENST00000516781 65 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 HMGN1P28-201ENST00000521340 364 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AC100870.1-201ENST00000522035 505 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 ERHP1-201ENST00000523006 310 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 DEFB108E-201ENST00000524692 240 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AC007458.1-201ENST00000542812 373 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AC067852.3-201ENST00000589177 561 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.2□□□□□ -1.74
RFXAPO00287 RNU6-85P-201ENST00000605989 107 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.2□□□□□ -1.74
RFXAPO00287 TUG1_2.1-201ENST00000614234 87 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 LINC00901.1-201ENST00000617252 152 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 MIR6852-201ENST00000621699 66 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFXAPO00287 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.2□□□□□ -1.74
RFXAPO00287 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFXAPO00287 AL592182.3-201ENST00000642132 3304 ntBASIC4.2□□□□□ -1.74
RFXAPO00287 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFXAPO00287 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RFXAPO00287 AL359893.1-201ENST00000447628 1580 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms