Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Z69908.1-201ENST00000622603 247 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
TMX2-CTNND1H3BSU7 DDX10P1-201ENST00000448545 1933 ntBASIC2.15□□□□□ -2.06
TMX2-CTNND1H3BSU7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-223P-201ENST00000362830 107 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-270P-201ENST00000364131 105 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNY4P16-201ENST00000364768 94 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORD116-9-201ENST00000384000 95 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORD116-3-201ENST00000384287 95 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORD116-7-201ENST00000384404 95 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORD116-5-201ENST00000384462 95 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-14P-201ENST00000384630 106 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL359634.1-202ENST00000404721 284 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL451054.2-201ENST00000420896 202 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL121871.1-201ENST00000443413 436 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND6P13-201ENST00000443510 523 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 MTND2P22-201ENST00000444325 1033 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 USP9YP12-201ENST00000450481 570 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092798.1-201ENST00000458542 409 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNA5SP269-201ENST00000459032 137 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL23AP41-201ENST00000484754 458 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 LARP1BP2-201ENST00000486594 519 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL049874.1-201ENST00000489560 388 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL359273.1-201ENST00000510918 627 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 DEFB108A-201ENST00000530110 222 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 KC877982.1-201ENST00000602313 470 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC004908.2-201ENST00000609090 574 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC093783.1-201ENST00000612976 329 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC013476.2-201ENST00000614456 459 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC025048.6-202ENST00000627667 438 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC005832.2-201ENST00000538921 1430 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 SDAD1P2-201ENST00000441308 2028 ntBASIC2.15□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC008568.2-201ENST00000623862 2313 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC022336.2-201ENST00000568966 2538 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL139276.1-201ENST00000311910 1001 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU5A-1-201ENST00000362698 116 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 U8.3-201ENST00000363321 132 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU4-91P-201ENST00000364778 135 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA75-201ENST00000384158 137 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL21P24-201ENST00000413752 448 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC008850.1-201ENST00000427546 362 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC009961.2-201ENST00000435771 251 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 USP9YP29-201ENST00000445112 563 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 ELOCP30-201ENST00000447108 299 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC020550.1-201ENST00000447385 163 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNRPGP9-201ENST00000456025 225 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL031183.1-201ENST00000457667 207 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNA5SP310-201ENST00000459084 116 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORD42A-201ENST00000459584 64 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL049714.1-201ENST00000466686 347 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPS20P22-201ENST00000473700 357 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC117522.2-201ENST00000510049 657 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 SNORA31.3-201ENST00000516029 96 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 ARL2BPP2-201ENST00000550907 489 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 RPL21P5-201ENST00000554662 472 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 PIGPP4-201ENST00000584447 307 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP000860.1-201ENST00000605250 559 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC135507.1-201ENST00000607214 561 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AP002826.1-201ENST00000608835 315 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC004908.3-201ENST00000610248 625 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC073114.1-201ENST00000612027 490 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AL158063.1-201ENST00000615349 536 ntBASIC2.14□□□□□ -2.07
TMX2-CTNND1H3BSU7 AC010133.1-201ENST00000615809 842 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms