Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AC058791.1-201ENST00000608412 3198 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 Y_RNA.315-201ENST00000365117 102 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RNU6-214P-201ENST00000384130 107 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 Y_RNA.482-201ENST00000384377 111 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RNU4-14P-201ENST00000410858 122 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RNU6-954P-201ENST00000411355 107 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AF228730.4-201ENST00000421457 183 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AC073587.1-201ENST00000447093 876 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RPS27P27-201ENST00000498779 255 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 PHBP14-201ENST00000512887 367 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RN7SKP24-201ENST00000515888 284 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RNU6-559P-201ENST00000516151 98 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 Y_RNA.701-201ENST00000516812 110 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 SYF2P1-201ENST00000550658 413 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AL355598.1-201ENST00000604169 202 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 ATP5A1P2-202ENST00000616464 443 ntBASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 RNA5SP399-201ENST00000364003 117 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 SNORA1.3-201ENST00000384676 136 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AL445529.1-201ENST00000398713 389 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 HMGB1P9-201ENST00000429856 646 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AL078601.1-201ENST00000444542 271 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 MTATP6P7-201ENST00000453315 681 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 RNU7-152P-201ENST00000458982 64 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC130509.1-201ENST00000464158 433 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 HMGB3P15-201ENST00000507326 574 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC026371.1-201ENST00000551867 419 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AL360157.1-201ENST00000565962 87 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 FRG2DP-202ENST00000566967 323 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 AP000787.2-201ENST00000604432 568 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 MIR7843-201ENST00000622274 79 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 DHX9P1-201ENST00000436565 3076 ntBASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC85CA6NKD9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC138393.1-203ENST00000327086 343 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 RNU6-778P-201ENST00000363269 103 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 SNORD116-29-201ENST00000384516 83 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 RNU6-95P-201ENST00000384697 107 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 MIR888-201ENST00000401186 77 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 MTCYBP4-201ENST00000401524 249 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 RN7SKP53-201ENST00000411337 315 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC007738.1-201ENST00000413892 348 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AL096701.2-201ENST00000416920 238 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AL583843.1-201ENST00000456070 346 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AL136097.1-201ENST00000456945 913 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC092798.1-201ENST00000458542 409 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC084357.1-201ENST00000473404 255 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC084198.1-201ENST00000477747 402 ntBASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC85CA6NKD9 AC025423.5-201ENST00000550230 219 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms