Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 Z75741.1-201ENST00000446793 314 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC008264.1-201ENST00000447612 367 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RPL23AP14-201ENST00000468281 468 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RN7SL504P-201ENST00000494496 287 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RNU2-69P-201ENST00000516061 100 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RNU6-928P-201ENST00000516876 104 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC009902.1-201ENST00000519351 183 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AP006245.1-201ENST00000522549 120 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 OR11H5P-201ENST00000554039 926 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 MTCO3P23-201ENST00000561363 289 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 MIR548AC-201ENST00000585049 88 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC073539.2-201ENST00000597113 165 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC092807.2-201ENST00000609367 243 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC022149.2-201ENST00000621061 203 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AF117829.1-206ENST00000621883 3802 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 MTND4P35-201ENST00000604257 1375 ntBASIC3.34□□□□□ -1.88
TBC1D3FA6NER0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
TBC1D3FA6NER0 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
TBC1D3FA6NER0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL356274.2-201ENST00000624379 3752 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 SNORA72.1-201ENST00000363485 129 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.399-201ENST00000383955 105 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 RNU6-45P-201ENST00000384471 107 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL162578.1-201ENST00000406202 378 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 RNU2-68P-201ENST00000410878 191 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL353678.1-201ENST00000422735 741 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 MYL8P-204ENST00000431574 518 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 HMGB3P11-201ENST00000440127 604 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL590664.1-201ENST00000448065 339 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1208P-201ENST00000459588 107 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC025465.4-201ENST00000513422 638 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC112206.3-201ENST00000514578 389 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC106782.4-201ENST00000568264 210 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC012119.1-201ENST00000603184 222 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL355073.2-201ENST00000612106 557 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 DUSP12P1-201ENST00000612874 516 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AC002076.2-201ENST00000617362 122 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
TBC1D3FA6NER0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RNU6-82P-201ENST00000363970 107 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 U3.12-201ENST00000364498 214 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.279-201ENST00000364763 95 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RNU6-395P-201ENST00000365662 106 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RNU6-434P-201ENST00000384376 107 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AL357075.1-201ENST00000404107 726 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RNU4-26P-201ENST00000410270 107 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RPL21P111-201ENST00000418453 477 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 ARL5AP1-201ENST00000418991 388 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 SNRPEP4-201ENST00000435815 279 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 MTND3P10-201ENST00000450967 341 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AL590639.1-201ENST00000456484 337 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AP000852.1-201ENST00000472460 573 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 Y_RNA.654-201ENST00000497848 106 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 RPL7P20-201ENST00000520308 745 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC007938.3-201ENST00000604965 623 ntBASIC3.32□□□□□ -1.88
TBC1D3FA6NER0 AC068831.7-201ENST00000616954 363 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms