Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AL161734.1-201ENST00000609720 557 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AC006338.1-201ENST00000618453 749 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 AC010149.2-201ENST00000637608 315 ntBASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM49BA6NDI0 MTND5P29-201ENST00000458676 1807 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 MTND5P26-201ENST00000426018 1752 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 MIR21-201ENST00000362134 72 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RNY4P24-201ENST00000362735 96 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RNU6-39P-201ENST00000384344 107 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC068050.1-201ENST00000394891 380 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AF274854.1-201ENST00000413236 615 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RPL23AP30-201ENST00000432419 501 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 FCF1P1-201ENST00000432690 571 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 TIMM9P1-201ENST00000436122 256 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RBM43P1-201ENST00000476891 1081 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AL160314.1-201ENST00000490836 438 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC010587.1-201ENST00000505809 469 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RNU6-720P-201ENST00000516363 108 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC245505.1-201ENST00000556398 224 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AL133153.1-201ENST00000557756 303 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 MIR3146-201ENST00000580367 79 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC025165.5-201ENST00000602802 578 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 NRBF2P5-201ENST00000603087 788 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AL136363.2-201ENST00000604173 851 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 NDUFA8P1-201ENST00000605525 367 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AC012557.2-201ENST00000605919 418 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 AP001506.1-201ENST00000615444 211 ntBASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM49BA6NDI0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 FTLP6-201ENST00000355274 422 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RNY3P13-201ENST00000365542 102 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MIR888-201ENST00000401186 77 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MIR548F1-201ENST00000408667 84 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC063976.3-201ENST00000426849 329 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL109933.2-201ENST00000452651 260 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 Y_RNA.672-201ENST00000516289 104 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RNA5SP337-201ENST00000517007 109 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RNU6-64P-201ENST00000517119 105 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC022616.3-201ENST00000523940 148 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 COX6CP5-201ENST00000527162 228 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 GLYCAM1-201ENST00000546596 285 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 ARL2BPP2-201ENST00000550907 489 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MIR3167-201ENST00000579623 85 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MIR3162-201ENST00000581818 82 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 MIR4293-201ENST00000584305 78 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 HMGN2P15-201ENST00000585707 270 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL645944.1-201ENST00000603857 493 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC007038.2-201ENST00000608095 740 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC015540.1-201ENST00000615828 501 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AC092608.2-201ENST00000624427 218 ntBASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM49BA6NDI0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms