Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 SNORA11.2-201ENST00000408318 127 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC097463.2-201ENST00000421074 142 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC092170.1-201ENST00000440211 356 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 MTCO1P53-201ENST00000441633 699 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 RPL32P28-201ENST00000443577 397 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 ARPC3P5-201ENST00000448802 534 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC018437.1-201ENST00000492214 406 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC091917.2-201ENST00000505002 744 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-885P-201ENST00000516607 104 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 CYCSP27-201ENST00000527643 293 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC005832.3-201ENST00000537929 631 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC090079.2-201ENST00000575289 768 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC116312.1-201ENST00000606841 314 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AL355802.3-201ENST00000607571 545 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AL157834.3-201ENST00000615543 103 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AC004009.2-201ENST00000623016 728 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AL512506.2-201ENST00000624472 458 ntBASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TCRBV3S1A0A5B6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 RNU2-36P-201ENST00000410361 191 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 RNA5SP501-201ENST00000410990 112 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AL136133.1-201ENST00000413694 376 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 TPTE2P1-204ENST00000435256 593 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 PTGES3P1-201ENST00000439531 483 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 MOB1AP2-201ENST00000446060 614 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 KATNBL1P6-201ENST00000453433 915 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 RNU6-902P-201ENST00000517212 91 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 OR5B19P-201ENST00000531766 928 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AC090502.2-201ENST00000549267 280 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 MIR3167-201ENST00000579623 85 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AC092953.2-201ENST00000608000 699 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AL163051.2-201ENST00000618976 735 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 U1.36-201ENST00000620684 176 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 AC080188.3-201ENST00000624842 748 ntBASIC0.78□□□□□ -2.28
TCRBV3S1A0A5B6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RNU1-39P-201ENST00000383897 165 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 MIR532-201ENST00000385025 91 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RNA5SP213-201ENST00000391031 106 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC078974.1-201ENST00000411597 223 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AP1B1P2-201ENST00000416196 106 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC019178.2-201ENST00000423595 505 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 MTCYBP32-201ENST00000427945 1084 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RPL7P34-201ENST00000433316 712 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC245517.4-201ENST00000448601 281 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC006512.1-201ENST00000468816 291 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RPS15AP17-201ENST00000470598 390 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RPL22P13-201ENST00000493291 347 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 RNU7-40P-201ENST00000516397 64 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 COPS8P3-201ENST00000526024 482 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 MTCO2P15-201ENST00000532655 656 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AL731537.2-201ENST00000561565 951 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC093519.1-201ENST00000566109 298 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC004805.2-201ENST00000605382 482 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 NDUFA8P1-201ENST00000605525 367 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC239868.4-201ENST00000608318 671 ntBASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TCRBV3S1A0A5B6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 MTND5P11-201ENST00000511037 1812 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 RNU6-439P-201ENST00000384188 106 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 RNU1-57P-201ENST00000384491 166 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 MIR515-2-201ENST00000384883 83 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 MIR515-1-201ENST00000384884 83 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 MIR29C-201ENST00000385231 88 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 RNU2-48P-201ENST00000410694 191 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 MTND2P5-201ENST00000432656 1006 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 AC017099.1-201ENST00000448261 1028 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 RNA5SP135-201ENST00000517019 125 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 EIF1AXP2-201ENST00000555940 413 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 NIFKP8-201ENST00000560500 874 ntBASIC0.76□□□□□ -2.29
TCRBV3S1A0A5B6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms