Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 MTND4P35-201ENST00000604257 1375 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
TCRBV7S3A2A0A539 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 Y_RNA.70-201ENST00000362886 110 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 RNU1-33P-201ENST00000364249 162 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 MIR578-201ENST00000384828 96 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 MIR325-201ENST00000385260 98 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 RNU2-41P-201ENST00000410991 178 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 USP9YP20-201ENST00000419224 558 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL158156.1-201ENST00000422509 473 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 TMEM167AP1-201ENST00000423409 219 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 MYL8P-204ENST00000431574 518 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL512844.2-201ENST00000433990 593 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC092573.2-201ENST00000434546 243 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 CECR9-201ENST00000453421 199 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 DYNLL1P5-201ENST00000467158 270 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC022493.1-201ENST00000492984 337 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 RNU6-189P-201ENST00000516120 101 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC005261.5-201ENST00000596280 355 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC009994.1-201ENST00000606889 253 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL357078.3-201ENST00000607528 618 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 U2.17-201ENST00000611454 95 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL731566.2-201ENST00000618971 317 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AC009248.2-201ENST00000619826 254 ntBASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.22□□□□□ -1.89
TCRBV7S3A2A0A539 AL161912.2-201ENST00000565707 3007 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 Y_RNA.33-201ENST00000362591 102 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 Y_RNA.373-201ENST00000365600 103 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RN7SKP32-201ENST00000410167 303 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RPL21P90-201ENST00000415692 466 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AL353621.1-201ENST00000418219 243 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RPL35AP12-201ENST00000425362 338 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC017083.1-201ENST00000428093 483 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 SNRPEP9-201ENST00000436794 238 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 IFNA20P-201ENST00000436840 528 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RPL7P12-201ENST00000446719 750 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RNU7-66P-201ENST00000459469 62 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 SNRPGP3-201ENST00000469405 227 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RN7SL293P-201ENST00000481765 281 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC020593.1-201ENST00000507399 299 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 HIGD1AP13-201ENST00000509878 289 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC008716.1-201ENST00000511084 513 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-507P-201ENST00000516045 100 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 RN7SKP256-201ENST00000517201 314 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC107953.1-201ENST00000522216 297 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC087241.2-201ENST00000535801 324 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC073539.2-201ENST00000597113 165 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 VN1R80P-201ENST00000597126 338 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC092747.3-201ENST00000603769 301 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC004805.2-201ENST00000605382 482 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AC073657.2-201ENST00000605661 303 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 Z82243.1-201ENST00000609432 473 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 FTX_3.1-201ENST00000610451 147 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 DUSP12P1-201ENST00000612874 516 ntBASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.21□□□□□ -1.9
TCRBV7S3A2A0A539 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-140P-201ENST00000384566 108 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 SNORA1.3-201ENST00000384676 136 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-1009P-201ENST00000390996 107 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 EIF4E2P1-201ENST00000393781 255 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 AL357075.1-201ENST00000404107 726 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 RNU2-68P-201ENST00000410878 191 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-607P-201ENST00000411283 108 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.2□□□□□ -1.9
TCRBV7S3A2A0A539 ZNF863P-201ENST00000426746 417 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms