Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 FABP5P15-201ENST00000453566 214 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 FO393415.2-201ENST00000480085 343 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 CKS1BP2-201ENST00000497342 240 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 HMGB1P35-201ENST00000503360 598 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC026414.1-201ENST00000504046 698 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC110760.3-202ENST00000515177 371 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC079598.5-201ENST00000547460 117 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC122134.1-202ENST00000569111 1201 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL354943.1-201ENST00000572103 781 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 SNORD53B-201ENST00000577887 78 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 MIR4285-201ENST00000581001 85 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL031274.2-201ENST00000599419 203 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AL645939.4-201ENST00000604495 135 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC009974.1-201ENST00000608881 455 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC138627.2-201ENST00000624202 601 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 AC099063.3-201ENST00000642066 185 ntBASIC1.15□□□□□ -2.23
TRAV3A0A0B4J244 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 RNU1-17P-201ENST00000363022 152 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 Y_RNA.140-201ENST00000363474 103 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 SNORA25B-201ENST00000365507 128 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 SNORA67.6-201ENST00000391093 99 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 RNA5SP212-201ENST00000391223 107 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 USP9YP6-201ENST00000413550 854 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 RPL23AP76-201ENST00000441860 458 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC021382.1-201ENST00000483523 359 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 MTCYBP16-201ENST00000509187 1129 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 SMURF2P1-201ENST00000514992 481 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 RNA5SP165-201ENST00000517142 115 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC034114.1-201ENST00000520293 285 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC090079.2-201ENST00000575289 768 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 MIR3167-201ENST00000579623 85 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 MIR4713-201ENST00000582691 75 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 MTCYBP22-201ENST00000603788 447 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC103810.8-201ENST00000607347 118 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC009237.15-201ENST00000610252 501 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV3A0A0B4J244 CDC27P3-201ENST00000635418 1910 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 CDR1-202ENST00000625883 1485 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 Z75746.1-201ENST00000440243 2080 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RNU1-62P-201ENST00000362599 164 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-952P-201ENST00000391164 108 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-174P-201ENST00000410406 106 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RNU2-68P-201ENST00000410878 191 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC074117.2-201ENST00000417130 397 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC007098.1-201ENST00000420122 367 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 EIF4EP2-201ENST00000422816 654 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AL160275.3-201ENST00000423876 471 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC010153.1-201ENST00000432862 727 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RSU1P2-202ENST00000437884 485 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 RNU7-136P-201ENST00000458819 69 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC027575.1-201ENST00000481064 460 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC008834.1-201ENST00000511612 175 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 MTND5P13-201ENST00000513046 1079 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC026616.1-201ENST00000523157 525 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 SLC2A13P1-201ENST00000531560 322 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 SNRPGP1-201ENST00000553864 222 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AP000942.3-201ENST00000603702 160 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AL161798.1-201ENST00000604630 131 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AC092953.2-201ENST00000608000 699 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AL359314.1-201ENST00000616913 261 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 AL109620.1-201ENST00000618738 1197 ntBASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
TRAV3A0A0B4J244 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-1167P-201ENST00000363227 94 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 RNU5B-1-201ENST00000363286 116 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 RNU6-236P-201ENST00000363886 106 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MIR561-201ENST00000385216 97 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 CISD1P1-201ENST00000393907 327 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 AL079342.2-201ENST00000403367 482 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 VN1R36P-201ENST00000414936 291 ntBASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV3A0A0B4J244 BX119904.4-201ENST00000424402 301 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms