Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col13a1Q9R1N9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm15173-201ENSMUST00000122049 433 ntBASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col13a1Q9R1N9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Gm13186-201ENSMUST00000118031 316 ntBASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col13a1Q9R1N9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.74□□□□□ -0.21
Col13a1Q9R1N9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms