Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nup50Q9JIH2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nup50Q9JIH2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup50Q9JIH2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup50Q9JIH2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup50Q9JIH2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup50Q9JIH2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms