Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd2Q9D9H2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd2Q9D9H2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldnd2Q9D9H2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldnd2Q9D9H2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Mir6349-201ENSMUST00000184059 97 ntBASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldnd2Q9D9H2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldnd2Q9D9H2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldnd2Q9D9H2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldnd2Q9D9H2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms