Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn22Q9D7U6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn22Q9D7U6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Gm28033-201ENSMUST00000184224 96 ntBASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn22Q9D7U6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Gm11336-201ENSMUST00000118168 334 ntBASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn22Q9D7U6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cldn22Q9D7U6 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms