Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pfdn1Q9CWM4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pfdn1Q9CWM4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pfdn1Q9CWM4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Gm10418-201ENSMUST00000100943 576 ntBASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pfdn1Q9CWM4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gm12251-201ENSMUST00000117893 792 ntBASIC14.3□□□□□ -0.12
Pfdn1Q9CWM4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms