Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Sec61bQ9CQS8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm27867-201ENSMUST00000184778 125 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm43084-201ENSMUST00000200696 947 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 AC138767.1-201ENSMUST00000222661 415 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 AC127349.1-201ENSMUST00000224590 266 ntBASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC8.68□□□□□ -1.02
Sec61bQ9CQS8 Gm43509-201ENSMUST00000196551 2594 ntBASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sec61bQ9CQS8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms