Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.87■□□□□ 0.13
Trim16Q99PP9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.87■□□□□ 0.13
Trim16Q99PP9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.87■□□□□ 0.13
Trim16Q99PP9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim16Q99PP9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.86■□□□□ 0.13
Trim16Q99PP9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.86■□□□□ 0.13
Trim16Q99PP9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Trim16Q99PP9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.85■□□□□ 0.13
Trim16Q99PP9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Gm22697-201ENSMUST00000175194 63 ntBASIC15.85■□□□□ 0.13
Trim16Q99PP9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim16Q99PP9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.84■□□□□ 0.13
Trim16Q99PP9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim16Q99PP9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim16Q99PP9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim16Q99PP9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim16Q99PP9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trim16Q99PP9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim16Q99PP9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms