Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp1b1Q99LU0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1b1Q99LU0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1b1Q99LU0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1b1Q99LU0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1b1Q99LU0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp1b1Q99LU0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Gm10231-201ENSMUST00000181584 441 ntBASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Gm27389-201ENSMUST00000183622 195 ntBASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Gm10175-202ENSMUST00000208752 441 ntBASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp1b1Q99LU0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Gm7977-201ENSMUST00000193787 748 ntBASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Gm18101-201ENSMUST00000215769 548 ntBASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Phf7-203ENSMUST00000226565 1971 ntBASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.32■□□□□ 0.04
Chmp1b1Q99LU0 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Gm22697-201ENSMUST00000175194 63 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp1b1Q99LU0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Gm13186-201ENSMUST00000118031 316 ntBASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp1b1Q99LU0 Actl10-202ENSMUST00000226583 1501 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms