Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 AC139887.3-201ENST00000568585 713 ntBASIC20.77■□□□□ 0.92
ALPK3Q96L96 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ALPK3Q96L96 AC140113.2-201ENST00000604370 208 ntBASIC20.77■□□□□ 0.92
ALPK3Q96L96 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALPK3Q96L96 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALPK3Q96L96 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.91
ALPK3Q96L96 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.77■□□□□ 0.91
ALPK3Q96L96 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 AL691403.2-201ENST00000618460 490 ntBASIC20.76■□□□□ 0.91
ALPK3Q96L96 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 RPL13AP23-201ENST00000480739 586 ntBASIC20.76■□□□□ 0.91
ALPK3Q96L96 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 AC009065.1-201ENST00000564055 1225 ntBASIC20.76■□□□□ 0.91
ALPK3Q96L96 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.76■□□□□ 0.91
ALPK3Q96L96 AL049840.3-201ENST00000602669 611 ntBASIC20.76■□□□□ 0.91
ALPK3Q96L96 AC064862.7-201ENST00000604520 867 ntBASIC20.76■□□□□ 0.91
ALPK3Q96L96 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALPK3Q96L96 AF106564.1-201ENST00000607058 2553 ntBASIC20.75■□□□□ 0.91
ALPK3Q96L96 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
ALPK3Q96L96 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 AC090616.6-201ENST00000582640 721 ntBASIC20.75■□□□□ 0.91
ALPK3Q96L96 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.75■□□□□ 0.91
ALPK3Q96L96 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ALPK3Q96L96 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALPK3Q96L96 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 MIR564-202ENST00000385049 94 ntBASIC20.74■□□□□ 0.91
ALPK3Q96L96 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 AC098831.1-202ENST00000438821 336 ntBASIC20.74■□□□□ 0.91
ALPK3Q96L96 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.74■□□□□ 0.91
ALPK3Q96L96 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALPK3Q96L96 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.74■□□□□ 0.91
ALPK3Q96L96 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms