Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhac1Q91Y10 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Gm16061-201ENSMUST00000122167 857 ntBASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhac1Q91Y10 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Gm13474-201ENSMUST00000122466 815 ntBASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhac1Q91Y10 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Gm7889-201ENSMUST00000185591 958 ntBASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhac1Q91Y10 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Gm18959-201ENSMUST00000208954 655 ntBASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhac1Q91Y10 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms