Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.16■□□□□ 0.98
Ddx54Q8K4L0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Gm22175-201ENSMUST00000175007 78 ntBASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Mir6990-201ENSMUST00000183724 91 ntBASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 AC124732.2-201ENSMUST00000221977 316 ntBASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx54Q8K4L0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
Ddx54Q8K4L0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx54Q8K4L0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Mir6404-201ENSMUST00000183699 94 ntBASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Gm43767-201ENSMUST00000198933 381 ntBASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx54Q8K4L0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx54Q8K4L0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms