Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gm7862-201ENSMUST00000121461 292 ntBASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gm9172-201ENSMUST00000212092 954 ntBASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgcll1Q8JZS7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.64■□□□□ 0.26
Hmgcll1Q8JZS7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hmgcll1Q8JZS7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Gm4459-201ENSMUST00000118750 468 ntBASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgcll1Q8JZS7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Gm12497-201ENSMUST00000138778 237 ntBASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hmgcll1Q8JZS7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Hmgcll1Q8JZS7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmgcll1Q8JZS7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms