Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam43aQ8BUP8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Odf3b-204ENSMUST00000227834 930 ntBASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam43aQ8BUP8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Fam43aQ8BUP8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam43aQ8BUP8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Fam43aQ8BUP8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms