Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nop53Q8BK35 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nop53Q8BK35 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nop53Q8BK35 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nop53Q8BK35 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.39■□□□□ 0.37
Nop53Q8BK35 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nop53Q8BK35 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop53Q8BK35 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.37■□□□□ 0.37
Nop53Q8BK35 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Gm13186-201ENSMUST00000118031 316 ntBASIC17.37■□□□□ 0.37
Nop53Q8BK35 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop53Q8BK35 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Gm7889-201ENSMUST00000185591 958 ntBASIC17.36■□□□□ 0.37
Nop53Q8BK35 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.36■□□□□ 0.37
Nop53Q8BK35 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop53Q8BK35 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nop53Q8BK35 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms