Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Depdc1bQ8BH88 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Depdc1bQ8BH88 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Depdc1bQ8BH88 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Depdc1bQ8BH88 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Gm11950-201ENSMUST00000121615 838 ntBASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Depdc1bQ8BH88 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.59■□□□□ 0.41
Depdc1bQ8BH88 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms