Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm9731-201ENSMUST00000209480 747 ntBASIC18.18■□□□□ 0.5
Abcf1Q6P542 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.18■□□□□ 0.5
Abcf1Q6P542 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcf1Q6P542 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Abcf1Q6P542 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Gm18959-201ENSMUST00000208954 655 ntBASIC18.17■□□□□ 0.5
Abcf1Q6P542 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.17■□□□□ 0.5
Abcf1Q6P542 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Gm7791-201ENSMUST00000219066 539 ntBASIC18.16■□□□□ 0.5
Abcf1Q6P542 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.16■□□□□ 0.5
Abcf1Q6P542 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcf1Q6P542 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abcf1Q6P542 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Abcf1Q6P542 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Abcf1Q6P542 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Abcf1Q6P542 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Abcf1Q6P542 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.14■□□□□ 0.49
Abcf1Q6P542 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcf1Q6P542 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms