Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Traf4Q61382 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Traf4Q61382 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Traf4Q61382 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.4□□□□□ -0.1
Traf4Q61382 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Traf4Q61382 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.39□□□□□ -0.11
Traf4Q61382 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Traf4Q61382 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Traf4Q61382 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Gm11950-201ENSMUST00000121615 838 ntBASIC14.39□□□□□ -0.11
Traf4Q61382 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.39□□□□□ -0.11
Traf4Q61382 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Traf4Q61382 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.39□□□□□ -0.11
Traf4Q61382 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Traf4Q61382 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.39□□□□□ -0.11
Traf4Q61382 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Traf4Q61382 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.38□□□□□ -0.11
Traf4Q61382 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Traf4Q61382 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Traf4Q61382 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Traf4Q61382 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf4Q61382 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.37□□□□□ -0.11
Traf4Q61382 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.37□□□□□ -0.11
Traf4Q61382 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Traf4Q61382 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Traf4Q61382 Gm17807-201ENSMUST00000186869 298 ntBASIC14.37□□□□□ -0.11
Traf4Q61382 Gm37722-201ENSMUST00000193757 208 ntBASIC14.37□□□□□ -0.11
Traf4Q61382 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Traf4Q61382 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.37□□□□□ -0.11
Traf4Q61382 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf4Q61382 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf4Q61382 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Traf4Q61382 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.36□□□□□ -0.11
Traf4Q61382 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf4Q61382 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms