Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Timm23-208ENSMUST00000226683 750 ntBASIC16.4■□□□□ 0.22
Hif1aQ61221 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.4■□□□□ 0.22
Hif1aQ61221 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.4■□□□□ 0.22
Hif1aQ61221 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hif1aQ61221 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hif1aQ61221 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hif1aQ61221 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.39■□□□□ 0.21
Hif1aQ61221 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Gm13186-201ENSMUST00000118031 316 ntBASIC16.39■□□□□ 0.21
Hif1aQ61221 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hif1aQ61221 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.39■□□□□ 0.21
Hif1aQ61221 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hif1aQ61221 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.38■□□□□ 0.21
Hif1aQ61221 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.38■□□□□ 0.21
Hif1aQ61221 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.38■□□□□ 0.21
Hif1aQ61221 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Prob1-201ENSMUST00000097619 3021 ntBASIC16.38■□□□□ 0.21
Hif1aQ61221 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hif1aQ61221 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hif1aQ61221 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.37■□□□□ 0.21
Hif1aQ61221 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hif1aQ61221 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms